QBMS: Query the Breeding Management System(s)

This R package assists breeders in linking data systems with their analytic pipelines, a crucial step in digitizing breeding processes. It supports querying and retrieving phenotypic and genotypic data from systems like 'EBS' <https://ebs.excellenceinbreeding.org/>, 'BMS' <https://bmspro.io>, 'BreedBase' <https://breedbase.org>, and 'GIGWA' <https://github.com/SouthGreenPlatform/Gigwa2> (using 'BrAPI' <https://brapi.org> calls). Extra helper functions support environmental data sources, including 'TerraClimate' <https://www.climatologylab.org/terraclimate.html> and 'FAO' 'HWSDv2' <https://gaez.fao.org/pages/hwsd> soil database.

Version:	1.5.0
Depends:	R (≥ 3.1.0)
Imports:	httr2, jsonlite, tcltk, utils, RNetCDF, stats, terra, RSQLite, DBI, future, future.apply
Suggests:	knitr, rmarkdown, remotes
Published:	2024-09-18
DOI:	10.32614/CRAN.package.QBMS
Author:	Khaled Al-Shamaa [aut, cre], Mariano Omar Crimi [ctb], Zakaria Kehel [ctb], Johan Aparicio [ctb], ICARDA [cph]
Maintainer:	Khaled Al-Shamaa <k.el-shamaa at cgiar.org>
BugReports:	https://github.com/icarda-git/QBMS/issues
License:	GPL (≥ 3)
URL:	https://icarda-git.github.io/QBMS/
NeedsCompilation:	no
Materials:	README NEWS
In views:	Agriculture
CRAN checks:	QBMS results

Documentation:

Reference manual:	QBMS.pdf
Vignettes:	BMS Example (source) BreedBase Example (source) EBS Example (source) GIGWA Example (source) FAO HWSD v2 Example (source) TerraClimate Example (source)

Downloads:

Package source:	QBMS_1.5.0.tar.gz
Windows binaries:	r-devel: QBMS_1.5.0.zip, r-release: QBMS_1.5.0.zip, r-oldrel: QBMS_1.5.0.zip
macOS binaries:	r-release (arm64): QBMS_1.5.0.tgz, r-oldrel (arm64): QBMS_1.5.0.tgz, r-release (x86_64): QBMS_1.5.0.tgz, r-oldrel (x86_64): QBMS_1.5.0.tgz
Old sources:	QBMS archive

Reverse dependencies:

Reverse imports:

qrlabelr

Linking:

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