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Commits on Jan 10, 2024

• Update INSTALL.txt

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Commits on Jan 3, 2024

• Fix memory value in -t Fixes #132

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Commits on Nov 6, 2023

• Remove spurious debug message. Relates to #127

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Commits on Apr 25, 2023

• Merge pull request #109 from nr23730/patch-1

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Commits on Mar 1, 2023

• Add release notes for 0.12.1

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• Put back gz file name detection.

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• Updated release notes for latest changes.

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• Added documentation of the new sequences added to the adapter plot

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• Remove deduplicated line from duplicate plot

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Commits on Feb 14, 2023

• Remove unwanted debugging statement

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• Merge branch 'master' of https://github.com/s-andrews/FastQC.git

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• Fix null pointer exception when file file can't be determined.

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Commits on Feb 1, 2023

• Raise warning limit for tile numbers. Fixes #112

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Commits on Jan 13, 2023

• Fix typo and formatting in command line help

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Commits on Jan 11, 2023

• Add htsjdk to build.xml

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Commits on Jan 5, 2023

• Add adapter changes to the release notes

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• Add bold font support to the SVG generator

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• Removed debugging statements

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• Use core Base64 conversion for SVG to avoid bug in the library we used

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• Add doctype to report to make it standards compliant.

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• Fix setting of svg parameter

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• Improve label colours sizes and positioning

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Commits on Jan 3, 2023

• Remove Solid adapater. Add poly A and poly G

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• Improve colourblind colours.

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  a193ac1

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• Fix bug in svg command line parsing

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  2b7c9a1

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• Fix gzip guessing for linux systems

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  2145733

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• Fix quoting around memory value in launch script.

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• Update version to v0.12.0 and update release notes

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• Fix old GPL version in LICENSE - it should be v3 everywhere

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• Add check for stupid characters in quality strings

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Commits on Aug 3, 2022

• Allow ubam extension. Fixes #10

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• Add bzip extensions to the fastq file filter.

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  d2d61b0

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• Add fix for super duplicated libraries. Fixes #87

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• Link --delete option to java code. Relates to #89

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• Add --delete option. Fixes #89

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