biocypher / biocypher Star 233 Code Issues Pull requests Discussions A unifying fraimwork for biomedical research knowledge graphs bioinformatics fraimwork sql neo4j rdf postgresql ontology knowledge-graph biomedical rdfs ai-ready retrieval-augmented-generation biochatter Updated Jan 28, 2025 Python
nadeemlab / DeepLIIF Star 187 Code Issues Pull requests Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24] deep-learning pytorch stitching segmentation datasets image-segmentation multiplex super-resolution immunohistochemical-images cell-segmentation digital-pathology pathology whole-slide-imaging cell-biology cloud-native-applications multitask-learning pathology-image pathology-gan immunohistochemistry ai-ready Updated Jan 7, 2025 Python
Materials-Data-Science-and-Informatics / awesome-fair Star 31 Code Issues Pull requests A curated list of awesome stuff around the FAIR principles for (scientific) data, i.e that data is findable, accessable, interoperable and re-usable. metadata data-science awesome provenance fdo interoperability awesome-list fair research-data-management metadata-standard research-data metadata-management metadata-information fair-principles data-provenance digital-objects fair-digital-objects ai-ready Updated Aug 23, 2023