GUIX:=/usr/local/bin/guix

GUIXTM:=${GUIX} time-machine --channels=guix/channels.pinned.scm -- \

shell --manifest=guix/manifest.scm

RSCRIPT=Rscript --vanilla

DATA:=data/extdata/cvc.csv

MANUSCRIPT:=manuscript

SECTIONDIR:=sections

OUTPUTDIR:=output

DISTDIR:=distribute

RMD=$(wildcard $(SECTIONDIR)/*.Rmd)

DATE=$(shell date +'%Y%m%d')

GITHEAD=$(shell git rev-parse --short HEAD)

.DELETE_ON_ERROR:

.PHONEY: \

clean clean-dist clean-output \

dist guix-pin-channels \

regenerate-data env

all: manuscript

manuscript: $(OUTPUTDIR)/$(MANUSCRIPT).html

$(OUTPUTDIR):

@mkdir -p $(OUTPUTDIR)

$(OUTPUTDIR)/%.html: %.Rmd $(RMD) $(DATA) guix/channels.pinned.scm guix/manifest.scm | $(OUTPUTDIR)

${GUIXTM} -- \

${RSCRIPT} -e "rmarkdown::render('$<', output_dir = '$(OUTPUTDIR)')"

$(OUTPUTDIR)/%.docx: %.Rmd $(RMD) $(DATA) guix/channels.pinned.scm guix/manifest.scm | $(OUTPUTDIR)

${GUIXTM} -- \

${RSCRIPT} -e "rmarkdown::render('$<', output_format = 'bookdown::word_document2', output_dir = '$(OUTPUTDIR)')"

$(DISTDIR):

@mkdir -p $(DISTDIR)

dist: $(OUTPUTDIR)/$(MANUSCRIPT).docx $(OUTPUTDIR)/$(MANUSCRIPT).html | $(DISTDIR)

cp $(OUTPUTDIR)/$(MANUSCRIPT).docx $(DISTDIR)/"$(DATE)_$(GITHEAD)_$(MANUSCRIPT).docx"

cp $(OUTPUTDIR)/$(MANUSCRIPT).html $(DISTDIR)/"$(DATE)_$(GITHEAD)_$(MANUSCRIPT).html"

## manual pinning guix channels to latest commits

guix-pin-channels: FORCE guix/channels.pinned.scm

${GUIX} time-machine --channels=guix/channels.scm -- \

describe -f channels > guix/channels.pinned.scm

FORCE:

guix/channels.pinned.scm: guix/channels.scm

${GUIX} time-machine --channels=guix/channels.scm -- \

describe -f channels > guix/channels.pinned.scm

## data/intdata and data/scripts are not part of the git repository

regenerate-data: \

data/intdata/ZVK-Doku.xlsx \

data/scripts/01-anonymize-and-prepare.R

${GUIX} time-machine --channels=guix/channels.pinned.scm -- \

shell --manifest=guix/manifest-data-preparation.scm -- \

Rscript data/scripts/01-anonymize-and-prepare.R

clean: clean-dist clean-output

clean-dist:

@rm -rf $(DISTDIR)

clean-output:

@rm -rf $(OUTPUTDIR)