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Cperigois opened this issue Apr 8, 2025 · 3 comments
Open

make html bug origin? #13473

Cperigois opened this issue Apr 8, 2025 · 3 comments
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awaiting:response Waiting for a response from the author of this issue type:bug

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@Cperigois
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Cperigois commented Apr 8, 2025 •
edited by timhoffm
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Describe the bug

Dear developpers, I get this issue while compiling my documentation. I'm quite convinced it comes from my programm, but the report issue, gives me no clues where this bug comes from. Do you have any idea of what would cause this error?

Thank you very much :)

How to Reproduce

(BBlack) perigois@coconut:~/PycharmProjects/BBlack/docs$ make html
Running Sphinx v7.4.7
Sphinx is using sys.path: ['/home/perigois/PycharmProjects/BBlack/docs/src/BBlack', '/home/perigois/PycharmProjects/BBlack/docs', '/home/perigois/anaconda3/envs/BBlack/bin', '/home/perigois/anaconda3/envs/BBlack/lib/python310.zip', '/home/perigois/anaconda3/envs/BBlack/lib/python3.10', '/home/perigois/anaconda3/envs/BBlack/lib/python3.10/lib-dynload', '/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages', '/home/perigois/PycharmProjects/BBlack/src']
loading translations [en]... done
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 2 source files that are out of date
updating environment: [new config] 2 added, 0 changed, 0 removed
Loading BBlack.cosmology.cosmology

Exception occurred:
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/docutils/transforms/misc.py", line 108, in visit_transition
    assert (isinstance(node.parent, nodes.document)
AssertionError
The full traceback has been saved in /tmp/sphinx-err-8pggvga8.log, if you want to report the issue to the developers.
Please also report this if it was a user error, so that a better error message can be provided next time.
A bug report can be filed in the tracker at <https://github.com/sphinx-doc/sphinx/issues>. Thanks!
Makefile:20: recipe for target 'html' failed
make: *** [html] Error 2

Environment Information

Sphinx v7.4.7

Sphinx extensions



Additional context


No response

      		
    

      
  





        



            
            

              
            

        

      


      
    








      

    



      

  
            







      

  
      



  

  @timhoffm





  


    

      

  

    

        
    
    

  


      
          
  
      
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            timhoffm
  

      

      

      commented


        Apr 8, 2025


      
    


  





      


        


  
    

      
          


The full traceback has been saved in /tmp/sphinx-err-8pggvga8.log




Do you have the full traceback?

      		
    

  





        


            

            
            

              
            

        

      


      

            
  
  

    
  
    
    

  

  

  


    












      

  
            

    

      
    

    


      

          @AA-Turner
AA-Turner




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  Waiting for a response from the author of this issue
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      Apr 8, 2025

    

  








      

  
      



  

  @Cperigois





  


    

      

  

    

        
    
    

  


      
          
  
      
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            Cperigois
  

      

      

      commented


        Apr 9, 2025


      
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          edited by AA-Turner
          
        
        
      

    
    
      
  
        
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Many thanks for your reply.


The code can be found there in the new-structure-2.0 branch : https://github.com/Cperigois/BBlack/tree/new-structure-2.0

there you may find all the files related to the documentation computation  : BBlack/docs/source/


Here is the content of the report file :


# Platform:         linux; (Linux-5.4.15-050415-generic-x86_64-with-glibc2.27)
# Sphinx version:   7.4.7
# Python version:   3.10.16 (CPython)
# Docutils version: 0.20.1
# Jinja2 version:   3.1.6
# Pygments version: 2.19.1

# Last messages:
#   writing output...
#   
#   building [html]: targets for 2 source files that are out of date
#   updating environment:
#   [new config]
#   2 added, 0 changed, 0 removed
#   
#   reading sources... [ 50%]
#   doc
#   

# Loaded extensions:
#   sphinx.ext.mathjax (7.4.7)
#   alabaster (0.7.16)
#   sphinxcontrib.applehelp (1.0.8)
#   sphinxcontrib.devhelp (1.0.6)
#   sphinxcontrib.htmlhelp (2.0.5)
#   sphinxcontrib.serializinghtml (1.1.10)
#   sphinxcontrib.qthelp (1.0.7)
#   sphinx.ext.autodoc.preserve_defaults (7.4.7)
#   sphinx.ext.autodoc.type_comment (7.4.7)
#   sphinx.ext.autodoc.typehints (7.4.7)
#   sphinx.ext.autodoc (7.4.7)
#   sphinxcontrib.jquery (4.1)
#   sphinx_rtd_theme (unknown version)
#   nbsphinx (0.9.3)
#   sphinx.ext.viewcode (7.4.7)
#   sphinx.ext.napoleon (7.4.7)
#   sphinx.ext.autosectionlabel (7.4.7)

# Traceback:
Traceback (most recent call last):
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/cmd/build.py", line 337, in build_main
    app.build(args.force_all, args.filenames)
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/application.py", line 378, in build
    self.builder.build_update()
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/builders/__init__.py", line 297, in build_update
    self.build(to_build,
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/builders/__init__.py", line 318, in build
    updated_docnames = set(self.read())
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/builders/__init__.py", line 425, in read
    self._read_serial(docnames)
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/builders/__init__.py", line 477, in _read_serial
    self.read_doc(docname)
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/builders/__init__.py", line 536, in read_doc
    publisher.publish()
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/docutils/core.py", line 236, in publish
    self.apply_transforms()
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/docutils/core.py", line 216, in apply_transforms
    self.document.transformer.apply_transforms()
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/sphinx/transforms/__init__.py", line 93, in apply_transforms
    super().apply_transforms()  # type: ignore[misc]
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/docutils/transforms/__init__.py", line 182, in apply_transforms
    transform.apply(**kwargs)
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/docutils/transforms/misc.py", line 98, in apply
    self.visit_transition(node)
  File "/home/perigois/anaconda3/envs/BBlack/lib/python3.10/site-packages/docutils/transforms/misc.py", line 108, in visit_transition
    assert (isinstance(node.parent, nodes.document)
AssertionError



Many thanks in advance for your help :)

      		
    

  





        


            

            
            

              
            

        

      


      

            
  
  

    
  
    
    

  

  

  


    












      

  
      



  

  @Cperigois





  


    

      

  

    

        
    
    

  


      
          
  
      
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Sorry, for the unreadable markdown ^^" here is the content of the error report file


error_report_sphinx.txt

      		
    

  





        


            

            
            

              
            

        

      


      

            
  
  

    
  
    
    

  

  

  


    












      

  
            

    


    

    

      
    

    


      

          @Cperigois
Cperigois




        reopened this

      Apr 11, 2025

    

  












  
  

    

      

  





  




  
  

              

  
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      3 participants
    

    

        
          @timhoffm 
        
          @AA-Turner 
        
          @Cperigois 
    

  






    

    




    






  

          

        



    



  





    

  


  


          



    



  

    

    

    





    


    

    

  






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