BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.
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Jan 29, 2024 - Jupyter Notebook
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pharmacovigilance
Here are 132 public repositories matching this topic...
R interface for FDA Adverse Event Reporting System
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Apr 10, 2026 - R
A collection of signal detection methods used in the field of pharmacovigilance
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Feb 10, 2025 - R
A powerful Unix-inspired command-line tool for searching scientific literature, built for terminal enthusiasts who prefer speed, automation, and minimal interfaces.
nlp automation annotations clinical-trials literature signal-detection nlp-machine-learning academia pv literature-review pharmacovigilance literature-mining thesis-project medical-writing literature-search clinical-trials-intervention literature-screening literature-prioritisation
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Jan 19, 2026 - Python
Smart Adverse Drug Reaction Assessment Tools.
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Dec 8, 2022 - Jupyter Notebook
FAERS Adverse Reaction Events database and OpenFDA API
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Feb 19, 2020 - HTML
This repository contains the code of Mining archive.org’s Twitter stream grab for Pharmacovigilance research gold paper.
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Jan 31, 2020 - Python
Code and Datasets for the paper "Towards early detection of adverse drug reactions: combining pre-clinical drug structures and post-market safety reports", published on BMC Medical Informatics and Decision Making in 2019.
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Aug 16, 2020 - Python
End-to-end AI pharmacovigilance platform for predicting adverse drug events and harm severity using FDA FAERS data.
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Jul 7, 2026 - Jupyter Notebook
a database for pediatric drug safety signals
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May 21, 2023 - R
Automated browser to download drug adverse reaction reports from the European Database of Suspected Adverse Reactions Reports (EudraVigilance)
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Jul 9, 2026 - Python
For this problem, we proposed the use of bidirectional-LSTM’s(Long Short Term Memory) with 1-D CNN layer to classify patient notes at character level and at word level. The 1-D CNN is employed to scale back the training time. In order to improve the performance, we will also feed the network combined word embedding consisting of Pre-trained word…
deep-neural-networks deep-learning word2vec machine-learning-algorithms word-embeddings extraction named-entities reactions lstm named-entity-recognition lstm-model lstm-neural-networks bidirectional-lstm cnn-text-classification unstructured-data pharmacovigilance adverse-drug-reaction drug-target-interactions
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Jul 3, 2020 - Jupyter Notebook
An R package for simulating spontaneous reports
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Feb 10, 2025 - R
SurVigilance can be used to access and collect data from various pharmacovigilance databases around the world.
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Jul 26, 2026 - Python
Drug Side Effect Checker - The Pharmacovigilance Dashboard Prototype build with FDA (FAERS) data
fda data-visualisation adverse-events side-effects drug-safety pharmacovigilance design-principles adverse-drug-reaction faers dashboards-tableau design-science-research fda-api
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Aug 9, 2023 - Jupyter Notebook
r children poster reproducible-research datatables tidyverse drugs pediatric ohdsi pharmacovigilance
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Jan 25, 2021 - R
An R package containing functions for quantifying drug exposure using routinely collected prescribing databases
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May 19, 2020 - R
Code and Datasets for the paper "A Computational Framework for Identifying Age Risks in Drug-Adverse Event Pairs", published on AMIA 2022 Informatics Summit.
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Jan 7, 2022 - R
The PVClinical project aims to build a web-based platform, built to support Active Pharmacovigilance processes via the integration of several heterogeneous data sources.
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Nov 23, 2022 - HTML
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Jul 1, 2020 - Python
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