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== Causes ==
Although its cause is poorly understood, situs ambiguus has been linked to family history of malformations<ref>{{cite journal |author=Martínez-Frías ML |title=Heterotaxia as an outcome of maternal diabetes: an epidemiological study |journal=American Journal of Medical Genetics |volume=99 |issue=2 |pages=142–6 |date=March 2001 |pmid=11241474 |doi=10.1002/1096-8628(2000)9999:999<00::AID-AJMG1139>3.0.CO;2-Z |url=}}</ref><ref>{{cite journal |vauthors=Maeyama K, Kosaki R, Yoshihashi H, Casey B, Kosaki K |title=Mutation analysis of left-right axis determining genes in NOD and ICR, strains susceptible to maternal diabetes |journal=Teratology |volume=63 |issue=3 |pages=119–26 |date=March 2001 |pmid=11283968 |doi=10.1002/tera.1022 |url=}}</ref> and maternal [[cocaine]] use,<ref>{{cite journal |vauthors=Kuehl KS, Loffredo C |title=Risk factors for heart disease associated with abnormal sidedness |journal=Teratology |volume=66 |issue=5 |pages=242–8 |date=November 2002 |pmid=12397632 |doi=10.1002/tera.10099 |url=}}</ref> suggesting both genetic and environmental factors play a role.<ref>{{cite journal |vauthors=Kuehl KS, Loffredo CA |title=Population-based study of l-transposition of the great arteries: possible associations with environmental factors |journal=Birth Defects Research. Part A, Clinical and Molecular Teratology |volume=67 |issue=3 |pages=162–7 |date=March 2003 |pmid=12797457 |doi=10.1002/bdra.10015 |url=}}</ref> Several genes in the [[Transforming growth factor beta|TGF-beta pathway]], which controls left-right patterning of visceral organs across the body axis, have been indicated in sporadic and familial cases of atrial isomerism. Disrupted mitochondria function has also been recently linked to heterotaxy. <ref>{{cite journal |author=Burkhalter MD, Sridhar A, Sampaio P, Jacinto R, Burczyk MS, Donow C, Angenendt M, Competence Network for Congenital Heart Defects Investigators, Hempel M, Walther P, Pennekamp P, Omran H, Lopes SS, Ware SM, Philipp M |title= Imbalanced mitochondrial function provokes heterotaxy via aberrant ciliogenesis |journal= J Clin Invest |volume=129 |issue=7 |pages=
== Pathophysiology ==
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Following cholangiogram, a [[Hepatoportoenterostomy|Kasai procedure]] is usually performed in cases of biliary atresia. In this surgery, a Y-shaped shunt is used to passage bile from the liver directly to the intestine. If this is unsuccessful, [[liver transplantation]] can be considered based on the overall health of the patient. The Kasai procedure is successful in approximately 80% of patients.<ref>{{Cite web|url = http://www.uptodate.com/contents/biliary-atresia?source=machineLearning&search=biliary+atresia&selectedTitle=1~45§ionRank=5&anchor=H7033368#H7033368|title = Biliary Atresia|date = August 3, 2015|accessdate = December 9, 2015|website = UpToDate|last = Erlichman|first = Jessi|display-authors=etal}}</ref> Following the operation, patients are advised to take fat-soluble vitamins, [[choleretic]]s, and [[Anti-inflammatory|anti-inflammatory medications]].
[[Functional asplenia|Functionally asplenic]] patients have an elevated lifetime risk of [[sepsis]], as they have no functional [[spleen]] for fighting [[infection]]. For this reason, asplenic patients are under constant observation for any signs of [[fever]] or infection. In the case of infection, patients are placed on controlled [[Empiric therapy|empiric antibiotic therapy]] to avoid development of [[Antimicrobial resistance|antibiotic resistance]].<ref>{{Cite web|url = http://www.uptodate.com/contents/clinical-features-and-management-of-sepsis-in-the-asplenic-patient?source=see_link§ionName=MANAGEMENT&anchor=H14#H14|title = Clinical features and management of sepsis in the asplenic patient.|date = December 11, 2014|accessdate = December 10, 2015|website = UpToDate|last = Pasternack|first = Mark S
Right-atrial and left-atrial isomerism and associated pulmonary issues are treated in a series of steps based on the severity of symptoms. Isomeric patients are first treated by inserting a shunt that will move incoming blood through the pulmonary circuit. The [[Fontan procedure]] routes blood through the patient's single [[Ventricle (heart)|ventricle]], to the [[lung]]s, and into [[Circulatory system|systemic circulation]]. This process is favorable in patients aged 2 to 5 years old. About 20-30% of patients will require a heart transplant.<ref>{{Cite journal|url = |title = "Contemporary outcomes after the Fontan procedure: A Pediatric Heart Network multicenter study.".|vauthors=Anderson PA, Sleeper LA, Mahony L |date = 2008|journal = Journal of the American College of Cardiology |volume=52 |issue=2 |pages=85–93|doi = 10.1016/j.jacc.2008.01.074 |pmid = 18598886|pmc = 4385517|display-authors=etal}}</ref> Left-atrial isomeric patients have less severe complications, as they typically have 2 functional ventricles. In this case, they can undergo biventricular repair to form 2 separate ventricles and functional associated [[Heart valve|valves]].
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