"""

maegatk: a maester genotyping tool kit

"""

from setuptools import find_packages, setup

dependencies = ['click', 'pysam', 'pytest', 'snakemake', 'biopython', 'optparse-pretty', 'regex', 'ruamel.yaml']

setup(

name='maegatk',

version='0.2.1',

url='https://github.com/caleblareau/maegatk',

license='MIT',

author='Caleb Lareau',

author_email='caleb.lareau@gmail.com',

description='Processing and quality control of mitochondrial genome variants from MAESTER data.',

long_description=__doc__,

packages=find_packages(exclude=['tests']),

include_package_data=True,

zip_safe=False,

platforms='any',

install_requires=dependencies,

entry_points={

'console_scripts': [

'maegatk = maegatk.cli:main',

'maegatk-indel = maegatk.cliindel:main',

],

},

classifiers=[

# As from http://pypi.python.org/pypi?%3Aaction=list_classifiers

# 'Development Status :: 1 - Planning',

# 'Development Status :: 2 - Pre-Alpha',

'Development Status :: 3 - Alpha',

# 'Development Status :: 4 - Beta',

# 'Development Status :: 5 - Production/Stable',

# 'Development Status :: 6 - Mature',

# 'Development Status :: 7 - Inactive',

'Environment :: Console',

'Intended Audience :: Developers',

'License :: OSI Approved :: MIT License',

'Operating System :: POSIX',

'Operating System :: MacOS',

'Operating System :: Unix',

'Programming Language :: Python',

'Programming Language :: Python :: 3',

'Topic :: Software Development :: Libraries :: Python Modules',

]

)