18112457AG2
18112457AG2
18112457AG2
Process chromatography
Efficacy
Sodium hydroxide has been shown to be effective in
removing proteins and nucleic acids. It is also effective
for inactivating most viruses, bacteria, yeasts, fungi,
and endotoxins. It is common practice in industrial
manufacturing to save time by adding a salt, such as
sodium chloride, to the sodium hydroxide solution to
combine cleaning with sanitization.
Proteins
Sodium hydroxide has been used extensively to remove
proteins from ion exchange, hydrophobic interaction, and
gel filtration media. Traditionally, the use of sodium
hydroxide with affinity chromatography media has been
restricted due to the limited stability of most immobilized
ligands. Today, recent developments have changed that
picture and modern Protein A-based affinity media, such as
MabSelect SuRe for monoclonal antibody purification, have
significantly improved compatibility with sodium hydroxide.
MabSelect SuRe, with its alkali-stabilized protein A-derived
ligand, was designed to withstand 0.1 to 0.5 M sodium
hydroxide solutions as cleaning agents.
Nucleic acids
Nucleic acids can bind tenaciously to anion exchangers.
However, work in our laboratories has shown that a
combination of 1 M sodium hydroxide and 3 M sodium
chloride, with a total contact time of one hour, effectively
removes radiolabelled calf thymus DNA from DEAE
Sepharose Fast Flow, a weak anion exchanger. A small
percentage of the radiolabelled DNA was retained, and
could not be eluted under any conditions tested. Others
have found that lower concentrations or shorter contact
times are insufficient to remove nucleic acid from DEAE
Sepharose Fast Flow and restore the mediums separation
capabilities.
Further work on Q Sepharose Fast Flow, a strong anion
exchanger, has shown that 1 M sodium hydroxide combined
with 1 M sodium chloride effectively removes DNA, but that
the level of removal is dependent on the nature of the sample
(5). The contact time for cleaning-in-place (CIP) in these
experiments was 2 hours. For one sample, DNase was required
to completely remove DNA from the anion exchanger.
Table 1. The inactivation of 8 different viruses* in 0.1 M and 0.5 M sodium hydroxide. Italicized titer values indicate that no virus was detected in the sample
and the values listed are theoretical minimum detectable titers.
HIV
BVDV
CPV
6
9.5 10
2.7 10
2.7 10
1.5 10
Virus titers
BHV
POL
2.0 10
6.9 10
1.9 10
1.2 10
2.4 10
1.5 10
9.6 10
4.5 10
SV-40
7.1 10
3.5 10
2.7 10
2.0 10
MLV
1.7 10
1.5 10
3.6 10
4.7 10
ADV
2.6 10
2.2 10
3.7 10
3.8 10
4.0 10
1.7 10
6.0 10
6.3 10
0.1 M NaOH
Spike
2.0 10
t = 0 min
5.9 10
t = 10 min
5.7 10
t = 20 min
5.8 10
t = 60 min
5.8 10
2.7 10
5.0 10
4.5 10
2.1 10
2.0 10
4.3 10
2.9 10
Inactivation (log10)
> 3.5
2.5
5.6
8.2
5.5
3.9
> 3.8
> 6.9
9.5 10
1.9 10
1.3 10
1.7 10
2.0 10
9.4 10
1.2 10
1.5 10
6.9 10
5.9 10
5.9 10
5.9 10
7.1 10
1.1 10
1.1 10
2.0 10
1.7 10
2.6 10
1.5 10
6.3 10
1.7 10
4.7 10
8.4 10
4.7 10
2
1
1
1
2.2 10
9.4 10
7.5 10
2.0 10
0.5 M NaOH
Spike
2.0 10
t = 0 min
5.7 10
t = 10 min
5.6 10
t = 20 min
5.6 10
t = 60 min
6.7 10
1.7 10
1.5 10
5.9 10
6.2 10
1.0 10
5.5 10
2.2 10
Inactivation (log10)
> 3.5
> 4.7
6.1
> 8.1
5.1
6.2
> 3.7
> 7.0
* HIV: human immunodeficiency virus type 1; BVDV: bovine viral diarrhea virus; CPV: canine parvovirus; BHV: bovine herpes virus type 1; POL: human poliovirus type 2; SV-40: simian virus-40;
MLV: murine leukemia virus; ADV: human adenovirus type 2. Data from Q-One Biotech Ltd., Todd Campus, West of Scotland Science Park, Glasgow G20 0XA, Scotland.
Virus titers expressed in TCID50 (Tissue Culture Infective Dose) units for all viruses except BHV and MLV (expressed in plaque forming units pfu).
01/2009 18-1124-57 AG
1
1
1
1
ATCC No.
Type
Escherichia coli
8739
bacterium gram
Staphylococcus aureus
6538
bacterium gram +
Pseudomonas aeruginosa
9027
bacterium gram
Bacillus subtilis
6633
spore-forming
bacterium
Candida albicans
10231
yeast
Aspergillus niger
16404
mould
Endotoxins
Time
Temp. (C)
0.01
2 h
4 or 22
S. aureus
0.1
1 h
4 or 22
C. albicans
0.5
1 h
4 or 22
A. niger
0.5
1 h
4 or 22
1.0
22
E. coli
NaOH (M)
B. subtilis spores
48 h
B. subtilis spores
1.0
8d
P. aeruginosa
0.5
1 h
22
2
3
Table 3. Antimicrobial effect of (log10 reduction) of sodium hydroxide with the addition of 20% ethanol on Bacillus subtilis spores
Antimicrobial treatment
Time
0.5 M NaOH
0.5 M NaOH
0.1 M NaOH
with 20% ethanol
0.1 M NaOH
with 20% ethanol
24 h
3 log
7 log
300 h
2 log
4 log
01/2009 18-1124-57 AG
Precautions
Endotoxin
ng/ml
80
70
Compatibility
100
90
60
50
0.1 M NaOH
40
0.5 M NaOH
1.0 M NaOH
30
20
10
Table 5. Functional stability of Butyl Sepharose 4 Fast Flow after CIP with
NaOH (adapted from ref. 18)
<0.3
2
8 10 12 14 16 18 20 22
50
Time (h)
01/2009 18-1124-57 AG
Weeks in 1 M NaOH
at room temperature
8.50
51.65
23.80
37.40
8.40
23.08
37.13
51.48
8.44
23.26
36.84
51.47
Pooled S.D. (n = 9)
0.12
0.36
0.17
0.08
100
80
60
15 min contact time with 0.1 M NaOH/cycle
60 min contact time with 0.1 M NaOH/cycle
15 min contact time with 0.5 M NaOH/cycle
15 min contact time with 0.1 M NaOH/cycle (MabSelect)
15 min contact time with 0.1 M
40
20
0
20
40
60
80
2.0
1.5
1.0
0.1 M NaOH
0.5 M NaOH
0.01 M HCl
0.5
0.0
50
100
150
Contact time (h)
Fig 3. Functional stability of Heparin Sepharose 6 Fast Flow after CIP with
NaOH and HCl.
01/2009 18-1124-57 AG
Stability range
Description
Working
Short-term
CIP
Long-term
operational
Storage
Gel filtration
Sephadex G-25
Sephacryl High Resolution
Superdex prep grade
Sepharose Fast Flow
213
311
312
313
213
213
214
214
213
311
312
313
0.01 M NaOH
20 % ethanol
0.01 M NaOH
0.01 M NaOH
413
212
1
29
1
29
212
412
312
1
29
1
610
413
212
413
212
213
212
212
413
314
214
214
214
214
314
213
214
214
314
214
314
214
114
114
214
314
413
212
313
212
212
413
411
212
413
413
212
413
212
213
212
212
413
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
Multimodal media
Capto adhere
Capto MMC
PlasmidSelect Xtra
312
312
311
214
214
213
312
212
311
0.01 M NaOH
0.01 M NaOH
20% ethanol
313
313
313
313
313
313
214
214
214
214
214
214
313
313
313
313
313
313
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
112
112
114
114
112
112
0.01 M NaOH
0.01 M NaOH
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Table 4. Continuation
Stability range
Description
Working
Short-term
CIP
Long-term
operational
Affinity media
Blue Sepharose 6 Fast Flow
412
313
412
2
Chelating Sepharose Fast Flow
48.5
214
313
2
IMAC Sepharose 6 Fast Flow
48.5
214
312
2
Ni Sepharose 6 Fast Flow
48.5
214
312
Heparin Sepharose 6 Fast Flow
412
413
412
4
3
4
nProtein A Sepharose 4 Fast Flow
2 9
2 10
39
4
3
4
MabSelect
2 9
2 11
310
4
3
MabSelect SuRe
2 9
0.10.5 M NaOH
312
4
3
MabSelect Xtra
2 9
212
310
4
3
4
rProtein A Sepharose Fast Flow
2 9
2 11
310
4
3
4
Protein G Sepharose 4 Fast Flow
2 9
2 10
39
4
3
4
rmp Protein A Sepharose Fast Flow
2 9
2 11
310
Working pH:
Storage
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
0.01 M NaOH
20% ethanol
20% ethanol,
2% Benzyl alcohol
20% ethanol,
2% Benzyl alcohol
20% ethanol,
2% Benzyl alcohol
20% ethanol
20% ethanol
20% ethanol
pH interval where the medium binds protein as intended or is needed for elution, without adverse long-term effect. This differs from operational due to the conditions outlined in
footnotes 13 below.
Short term pH: pH interval where the medium can be subjected to cleaning- or sanitization-in-place (accumulated 90400 hours at room temperature) without significant change in function.
Long term:
pH interval where the medium can be operated without significant change in function.
Storage:
pH below 3 is sometimes required to elute strongly bound Igs. However, protein ligands may hydrolyze at very low pH.
Many of these media are supplied wet in 20% ethanol. As an alternative to NaOH, 20% ethanol can be used for storage. Storage in ethanol should be buffered for products containing S or SP ligands
(0.2 M sodium acetate) and heparin ligands (50 mM sodium acetate, pH 7.2). 2% benzyl alcohol is yet another alternative storage solution.
The data presented here are an overview over recommended ranges. For detailed information on chromatographic stability and leakage of GE Healthcare media, please contact our specialists in process
chromatography or regulatory affairs. Without significant change means that the media will pass our QC test again.
References
1. Adner, N., Sofer, G. Biotechnology Product Validation, part 3: Chromatography
Cleaning Validation. Biopharm 7, 44-48 (1994).
2. Block, S.S. Disinfection, Sterilization, and Preservation, Lea & Febiger, Philadelphia
(1991).
15. Drevin, I., Johansson, B-L. Stability of Superdex 75 prep grade and Superdex
200 prep grade under different chromatographic conditions. J. Chromatogr. 547
3130 (1991).
4. Seely, R.J., Wight, H.D., Fry, H.H., Rudge, S.R., Slaff, G.F. Biotechnology product
validation, part 7: validation of chromatography resin useful life. BioPharm 7
4148 (1994).
5. Dasarathy, Y. A validatable cleaning in place (CIP) protocol for total DNA clearance
from an anion exchange resin. BioPharm 9 4144 (1996).
6. MuLV Inactivation (QBI Protocol #31012), 1989, Quality Biotech Inc., Copewood
St., Camden, NJ 08103.
8. Technology Report No. 3, 1990, Quality Biotech Inc., Copewood St., Camden,
NJ 08103.
18. Berggrund, A., Drevin, I., Knuuttila, K-G., Wardhammar, J., Johansson, B-L.
Chemical and chromatographic characterization of a new BioProcess medium
for hydrophobic interaction chromatography: Butyl Sepharose 4 Fast Flow.
Process Biochem. 29 455463 (1994).
9. Jungbauer, A., Lettner, H.P., Guerrier, L., and Boschetti, E. Chemical sanitization in
process chromatography, Part 2: In situ treatment of packed columns and longterm stability of resins. BioPharm 7 3742 (1994).
19. Hellberg, U., Ivarsson, J-P., Johansson, B-L. Characteristics of Superdex prep
grade media for gel filtration chromatography of proteins and peptides.
Process Biochem. 31 163172 (1996).
20. Poster: The use of NaOH for CIP of rProtein A media: a 300 cycle study,
GE Healthcare (Code No. 18-1177-64)
7. Taylor, D.M. Inactivation of BSE agent. Dev. Biol. Standard 75 97102 (1991).
22. Data file: Heparin Sepharose 6 Fast Flow, GE Healthcare, 18-1060-76, Edition AB
(2004).
01/2009 18-1124-57 AG
imagination at work
18-1124-57 AG 01/2009
Elanders 2009