Install

INSTALLATION
Installation of XPPAUT is done either by downloading the source code and

compiling it or downloading one of the binary versions. I will give sample
installations for UNIX, Windows, and MacOS X. If you are totally clueless
at compiling source code, it is best to either have your system administrator
install it for you or download a precompiled binary for your computer. There
are compiled versions available for Linux, SUN, HP, Windows, and Mac OSX.
1 Installation on UNIX.
1.1 Installation from the source code.
Create a directory called xppaut and change to this directory by typing:
mkdir xppaut
cd xppaut
Step 1. Download the compressed tarred source code xppaut latest.tar.gz

into this directory from one of the two URLs:
http://www.math.pitt.edu/asympbard/xpp/xpp.html
http://www.cnbc.cmu.edu/bard/files.html
Step 2. Uncompress and untar the archive:
gunzip xppaut_latest.tar.gz
tar xf xppaut_latest.tar
This will create a series of files and subdirectories.

Step 3. Type
make
and lots of things will scroll by including occasional warnings (that you
can safely ignore). If you get no errors, then you probably have succeeded
in the compilation. If the compilation stops very quickly, then you prob-
ably you will have to edit the Makefile according to the architecture of
your computer. Look at the README file and the Makefile which has
suggestions for many platforms.
Step 4. If you successfully have compiled the program, then you should have
a file xppaut in your directory. To see, type
ls xppaut
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If you see something like xppaut* listed then you have succeeded. If
you dont see this, then the compilation was unsuccessful. Consult the
README file for a variety of possible fixes. Also, there are many com-
ments in the Makefiles that are included with the package. I have not
yet found a computer on which I cannot compile the program. Common
problems are the wrong path to the X Windows libraries, nonexistence of
ranlib among others.
Step 5. Once you have compiled it, just move the executable to someplace
in your path. (The usual is /usr/local/bin but you must have root
privileges to do this.) XPPAUT needs no environment information.
1.2 Installation from binaries.

Some binaries are available at one or both of the above URLs. You should down-
load these as well as the source code above. The source code has many examples
and the XPPAUT reference manual. Download a binary, e.g., xppaut4.6 hpux.gz
and uncompress it with the command gunzip xppaut4.6 hpux.gz and copy it
to the desired directory. The binaries are missing things like the example files
and the documentation. Download the source code to get these.
1.3 Additional UNIX setup.

In many systems, the zooming and cursor movement does not always work prop-
erly. In these systems, you want to call XPPAUT with an additional command
line argument, e.g.,
xppaut -xorfix file.ode
This will usually fix these problems. By default, XPPAUT comes up with all the
windows available. You may want to have XPPAUT come up with all but the
main window iconified. To do this, add the command line argument, -iconify.
On Linux, the standard window manager, fvwm does not properly iconify the
windows so you should not use this option. You can use the alias command in
your shell to call XPPAUT with these command line arguments. Alternatively,
create a text file called, e.g., myxpp with the following line in it:
\usr\local\bin\xppaut %1 %2 -iconify -xorfix
Save the file and make it executable by typing chmod +x myxpp. Now if you
call myxpp, it will have the two command-line options enabled.
2 Native MS Windows NT/95/98/2000

Just download the program winpp.zip into a folder, say wpp and then use
Winzip or a similar program to unzip the file. Create a shortcut to winpp.
This version does not have all the features of the full version. Furthermore, the
2
interface is quite different. Most of the equation files will work for this version
and most of the standard features are extant. There is a binary X version for
Windows which is identical to the full UNIX version and I recommend that you
use that instead as this book describes the X version. (See the next section.)
3 X-windows version on Windows.

This is the recommended way to run the program in the Windows environment.
It is only slightly more difficult to install. It does not use the Windows API,
but works identically to the UNIX version. NOTE. If you have only used an
X-windows emulator to log into another machine, this may be a bit of a surprise.
You can run local programs which are properly compiled X-windows programs
right on your PC with the X-emulator running. You do not have to be on a
network to run this program on your Windows PC.
Before you download XPPAUT on a Windows machine, you should have
X-windows emulator. There are a number of them available at a cost or as
demos. There are at least three that are very inexpensive:
X-WinPro: The demo version runs for 30 minutes at a time and the full
version is $90. URL: http://www.labf.com/index.html
X-Win32: The demo version runs for 120 minutes at a time. I use this product
at home. Prices range from $50 for students to $200 for corporations.
URL: http://www.starnet.com/productinfo/
MI/X: This is the smallest and has the fewest features. The demo lasts for 15
days. The cost is $25. URL:http://www.microimages.com/
They are all pretty simple to install and take up very little disk space. Many
universities have site licenses for X-servers such as Exceed (see their site:
http://www.hummingbird.com/products/nc/exceed).
Here are the steps to install XPPAUT in Windows:

Step 1. Create a folder tmp that will be a temporary directory. Create another
folder called xpp.
Step 2. If you have an X-windows emulator already, then skip this step.
Otherwise, you should install one of the above Xservers from the tmp
directory or the desktop. I have an old version of the MI/X server available
to download. If you want to try it, here is how:
Download the two files into the tmp directory: runme1st.exe and
file000.bin.
Run the program runme1st.exe to install an X windows server onto
your computer. This server only needs a few megabytes of disk space
so it is pretty small. Test the installation by clicking on the START
menu and running the program found under TNT Lite.
3
Step 3. Download the file xpp4win.zip into the folder xpp. Unzip this with
the Winzip utility. There will be a number of files including xppaut.exe.
Note that there are two dynamic link libraries (DLLs) in the zipped file,
so, if you want to move xppaut.exe to a different directory, you should
move the DLLs there as well. To make it available everywher, you can copy
xppaut.exe, cygwin1.dll, and libX11.dll into your Programs directory
or any other directory in your path.
Step 4. Test your download.
Step A. Start your X-server.

Step B. Open a MS-DOS prompt from the START menu. Change to the
xpp directory. (In Windows 2000, this is called Command Prompt.
It is available off the Start/Applications menu. If you cannot find it,
click on Run and type in command.com.)
Step C Now you have to tell X where to send the display.
If you are on a network. Type set DISPLAY=mypc:0.0 where
mypc is the name of your PC on the network.
If you are not on a network. Type set DISPLAY=127.0.0.1:0.0
Note that even on a network, the second command usually works.
Step D You are now ready to run. Type xppaut lecar.ode and XP-
PAUT should fire up in the X-window. If not, then check that you
have started the X server and set the DISPLAY correctly. Note that,
if you get an error Cant open display then you should try to find
out the name of your PC as that is probably the problem. Another
possibility is that your X server wont let your PC host the display.
Look for something that allows you to set HOSTS in your X-server
and set the host to your display name.
Step E. If successful, exit XPPAUT by clicking on the File and then
the Quit entry and answer Yes.
NOTE. My home computer is not on a network, so I have just created

a batch file xpp.bat and included in it a line that sets the DISPLAY for
me:
set DISPLAY=127.0.0.1:0.0
C:\xpp\xppaut %1 %2
4 Installation on MacOSX
Installation on Macintosh computers running OSX is possible by downloading
the source code for XPPAUT and then compiling it using the software devel-
opment tools provided for the new OS. In addition, you will need to download
the X development libraries to compile it. The following steps were helpfully
4
provided to me by Chris Fall and James Sneyd. I have managed to test this on
one laptop and everything seems to work. A Mac OSX binary can be found on
the web site if you dont want to compile it yourself.
1. Make sure you get and install the full Developer Kit for Mac OSX. This
is how you get the cc compiler.
2. Install XFree86 on OSX. Download from
ftp://ftp.xfree86.org/pub/XFree86/4.1.0/binaries/Darwin-ppc/
Make sure (no matter what the Install file says) that you also get the
Xprog.tgz bundle. You need it.
3. Get the xpp source code and put it in a directory of your choice. Ill
assume youve called it xpp. Untar the archive.
4. Make the following changes in the MAC system directories. (I think this
is a bug in their header files.)
copy /usr/include/dirent.h to your xpp directory. Ill assume
youve called it dirent.h locally.
copy /usr/include/sys/dirent.h to your xpp directory (giving it
a new name obviously. I called it sysdirent.h).
In the file read dir.c change the #include <dirent.h> statement
to call your local copy of dirent.h, not the one in /usr/include.
In your local copy of dirent.h, change the #include <sys/dirent.h>
statement to call your local copy of sysdirent.h.
In your local copy of sysdirent.h, change the lines:
u_int32_t d_fileno; /* file number of entry */
u_int16_t d_reclen; /* length of this record */
u_int8_t d_type; /* file type, see below */
u_int8_t d_namlen; /* length of string in d_name */
to the new lines:
unsigned long d_fileno; /* file number of entry */
unsigned short d_reclen; /* length of this record */
unsigned char d_type; /* file type, see below */
insigned char d_namlen; /* length of string in d_name */
(These occur in the struct dirent declaration) and save the file.
5. In the Makefile use the following options
CC= cc
CFLAGS= -O -DAUTO -DCVODE_YES -I/usr/X11R6/include
LDFLAGS= -L/usr/X11R6/lib
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AUTLIBS= -lf2c -lX11 -lm
LIBS= -lX11 -lm
OTHERLIBS= libcvode.a libf2cm.a
Note that in the subdirectories, cvodesrc and libI77 make sure that
CC=cc.
Then in the main directory, type make and everything should go fine. The
rest of the story is like the UNIX installation.

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INSTALLATION

Installation of XPPAUT is done either by downloading the source code and

Step 1. Download the compressed tarred source code xppaut latest.tar.gz

This will create a series of files and subdirectories.

1.2 Installation from binaries.

1.3 Additional UNIX setup.

2 Native MS Windows NT/95/98/2000

3 X-windows version on Windows.

Here are the steps to install XPPAUT in Windows:

Step A. Start your X-server.

NOTE. My home computer is not on a network, so I have just created

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