Production, Optimization and Characterisation of Chitosanase of Bacillus Sp. and Its Applications in Nanotechnology
Production, Optimization and Characterisation of Chitosanase of Bacillus Sp. and Its Applications in Nanotechnology
Production, Optimization and Characterisation of Chitosanase of Bacillus Sp. and Its Applications in Nanotechnology
https://doi.org/10.1007/s10876-019-01520-z (0123456789().,-volV)(0123456789().,-volV)
ORIGINAL PAPER
Abstract
Chitosanases is a class of enzymes which hydrolyse chitosan, a natural biopolymer consisting of D-glucosamine in various
degrees. In this study, chitosanase producing Bacillus sp. was isolated from soil sample. Chitosanase production was
optimized using response surface methodology and the produced chitosanase was characterized. The crude enzyme was
found to possess antibacterial and antifungal activity. Chitosanase enzyme was used for trimming chitosan based polymeric
nanoparticles produced using sodium trimetaphosphate chelator. Chitosanase enzyme was also utilized for synthesis of
silver nanoparticles which were then characterized by UV–Vis, FTIR, SEM, TEM and AFM. The produced nanoparticles
were checked for antibacterial and antifungal activity.
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diluted and spread plate was performed over the medium the amount of enzyme required to liberate 1 lmol of D-glu-
containing (g L-1): Na2HPO4—6; KH2PO4—3; NH4Cl— cosamine per min under the assay conditions.
2; NaCl—5; MgSO4—1; peptone—5, Agar—20 and chi-
tosan 20 (dissolved with 10 mL of 10% acetic acid). Plates Optimization of Enzyme Production
were incubated at room temperature for 48 h. The colonies
with highest chitosan hydrolyzing ability was picked up To determine the optimal incubation time, crude enzyme
and purified by repeated streaking on chitosan rich media was extracted from the above mentioned media for every
plates. Obtained pure culture was maintained on chitosan 5th day and enzyme activity was checked using dinitros-
rich media and stored at 4 C. alicylic acid method for a period of 30 days [18]. Likewise,
optimal NaCl concentration (0.5–2.5%), pH (4–9), Tem-
Identification of Bacteria perature (25, 30, 35, 37 and 40 C) and Agitation were
determined by incubating the inoculated media at optimal
The isolated organism was identified by its microscopic incubation time. Enzyme activity was determined by
analysis, biochemical tests and 16S rRNA sequencing. 16S aforementioned method [18].
rRNA sequence was submitted in GENBANK.
Response Surface Methodology
Production and Optimisation of Enzyme
Production Response Surface Methodology was used for biomass
production and optimization of chitosanase enzyme pro-
Production and Extraction of Crude Enzyme duction [19–21]. The optimal conditions required for the
biomass production and production of chitosanase enzyme
10 6 CFU/mL culture was allowed to grow on minimal media were determined and the effects of these variables have
containing (g L-1): Na2HPO4—6; KH2PO4—3; NH4Cl—2; been assessed using RSM. Four parameters such as incu-
NaCl—5; MgSO4—1; peptone—5 and chitosan 20 (dis- bation time, pH, temperature and agitation were used for
solved with 10 mL of 10% acetic acid). After appropriate designing the experiment (Tables 1, 2).
days of incubation, the broth was filtered using no. 2 What- The general polynomial equation was used
mann (Maidstone, UK) filter paper to remove the partially
Equation ðYÞ ¼ a0 þ a1 X1 þ a2 X2 þ a3 X3 þ a4 X4 þ a11 X21
dissolved chitosan residues. The filtrate was then centrifuged
at 5000g for 15 min. The pellet was discarded, and super- þ a22 X22 þ a33 X23 þ a44 X24 þ a12 X1 X2 þ a13 X1 X3
natant was used for further studies. In order to prevent þ a14 X1 X4 þ a23 X2 X3 þ a24 X2 X4 þ a34 X3 X4
enzyme autolysis, all procedures were carried out at 4 C.
where Y is predicted response; X1, X2, X3, X4 are inde-
Enzyme Activity pendent variables; a0 is an offset term; a1, a2, a3, a4 are
coefficients of linear effects; a11, a22, a33, a44 are coeffi-
Chitosanase activity was estimated using chitosan as the cients of squared effects; a12, a13, a14, a23, a34 are coeffi-
standard substrate using the method followed by Wee et al. cients of interaction terms.
[18]. 940 lL of 2% (w/v) chitosan was added to 10 mmol/L
sodium citrate buffer (pH 6.0). To this, 30 lL of crude Characterization of Crude Enzyme
enzyme was added. The reaction was carried out at 60 C for
10 min. After incubation, the reaction was stopped by adding Chitosanase Activity
30 lL of 10 M NaOH. The solution was then centrifuged at
10,000g for 15 min. The amount of reducing sugar present in Maximum chitosanase activity was determined at various
the supernatant was measured at 520 nm using dinitrosali- pH and temperatures using chitosan as the standard sub-
cylic acid method, where D-glucosamine was used as a strate. The reactions were carried out by incubating 2%
standard. One unit (1 U) of chitosanase activity is defined as substrate and crude enzyme at different pH using Citrate
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Production, Optimization and Characterisation of Chitosanase of Bacillus sp. and its…
90
80
Enzyme Activity (U/ml)
70
60
50
40
30
20
10
0
4 5 6 7 8 9
pH
25
Enzyme Activity (U/ml)
20
15
10
0
25 30 35 37 40
Temperature (0C)
Fig. 2 Enzyme production at various incubation time Fig. 4 Enzyme production at various temperatures
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A. V. Samrot et al.
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Production, Optimization and Characterisation of Chitosanase of Bacillus sp. and its…
period of 10 min at pH 6 and 40 C. The enzyme hydrol- Germany), Atomic Force Microscopy (AFM) (Bruker,
ysis reaction was stopped via heat fixing by boiling for Germany) and Transmission Electron Microscopy (TEM)
5 min. After cooling, samples were centrifuged at (TEECNAI G2 Spirit Biotwin—120 kV).
3500g for 10 min and subsequently lyophilized. The
enzyme treated chitosan nanoparticles were analysed by Bioactivity Studies
Scanning Electron Microscopy (Zeiss Ultra Plus, Ger-
many) for the size reduction caused by the enzyme on the Antibacterial Activity of Silver Nanoparticles
nanoparticles.
Bactericidal activity of silver nanoparticles was evaluated
Synthesis of Silver Nanoparticles using agar well diffusion method. The antibacterial activity
of different concentrations of silver nanoparticles (2, 4, 6
5 mL of crude chitosanase enzyme was mixed with 25 mL and 8 lg/mL) was performed against gram positive
of 3 mM silver nitrate and kept in dark for the synthesis of Bacillus subtilis and Gram negative Pseudomonas aerugi-
silver nanoparticles at room temperature for 24 h [26, 27]. nosa [28, 29].
After 24 h, the solution was centrifuged at 6000g to collect
silver nanoparticles and was lyophilised and stored in a Swarming Motility
black container at 4 C.
Swarming plates supplemented with 50 lg/mL of silver
Characterisation of Silver Nanoparticles nanoparticles were inoculated with Gram positive Bacillus
subtilis and Gram negative Pseudomonas aeruginosa using
The silver nanoparticles produced using the crude chi- the procedure as reported earlier [27, 30, 31].
tosanase enzyme was characterized using Fourier Trans-
form Infrared Spectroscopy (FTIR) (Shimadzu, Japan),
Scanning Electron Microscopy (SEM) (Zeiss Ultra Plus,
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A. V. Samrot et al.
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Production, Optimization and Characterisation of Chitosanase of Bacillus sp. and its…
a b
Design-Expert® Software Design-Expert® Software
Biomass Biomass
24.33 24.33
6.27 6.27
25 25
X1 = A: Incubation time X1 = A: Incubation time
X2 = B: pH 20.5
X2 = C: Temperature
21
17
Biomass
D: Agitation = 50.00 D: Agitation = 50.00
11.5
13
7
9
30.00
40.00 30.00
5.00
25.00 35.00 25.00
6.00
20.00 30.00 20.00
7.00
A: Incubation time 15.00 8.00
C: Temperature
25.00 15.00
A: Incubation time
10.00 9.00
B: pH 20.00 10.00
c d
Design-Expert® Software
Design-Expert® Software
Biomass
Biomass 24.33
24.33
6.27
6.27
25
25 X1 = B: pH
X1 = A: Incubation time X2 = C: Temperature
X2 = D: Agitation 20
21.75 Actual Factors
Actual Factors A: Incubation time = 20.00
B: pH = 7.00 D: Agitation = 50.00 15
Biomass
18.5
Biomass
C: Temperature = 30.00
10
15.25
5
12
40.00
35.00
5.00
30.00 6.00
100.00 30.00
7.00
75.00 25.00
25.00 C: Temperature
8.00
50.00 20.00
B: pH 9.00 20.00
15.00
D: Agitation
25.00 A: Incubation time
0.00 10.00
e f
Design-Expert® Software Design-Expert® Software
Biomass Biomass
24.33 24.33
6.27 6.27
25 25
X1 = B: pH X1 = C: Temperature
X2 = D: Agitation X2 = D: Agitation 22
21.25
17.5
Biomass
16
13.75
13
10
100.00 100.00
5.00 40.00
75.00 75.00
6.00 35.00
7.00 50.00 50.00 30.00
B: pH
8.00 25.00
D: Agitation D: Agitation 25.00 25.00
C: Temperature
9.00 0.00 0.00 20.00
Fig. 6 Surface plot and Contour plot for biomass production. a Incubation time versus pH, b temperature versus incubation time, c agitation
versus incubation time, d pH versus temperature, e agitation versus pH, f agitation versus temperature
Enzyme activity ðY) ¼ þ 72:04 þ 9:34A 6:44B þ 5:04C ANOVA for response surface polynomial model in case
0:46D 5:05AB 0:75AC þ 0:58AD þ 7:83BC of biomass production gave P values of the model
1:20BD 2:10CD 14:34A2 20:87B2 (P \ 0.0001), implying its significance. The coefficient of
variation of the model was (CV = 6.358072%). The
12:72C2 8:04D2
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A. V. Samrot et al.
a b
Design-Expert® Software Design-Expert® Software
Enzyme activity
X2 = B: pH 78.75
65.5
Enzyme activity
46.25
36
30
30.00
25.00
30.00
20.00
25.00
5.00 A: Incubation time
6.00 15.00
20.00 20.00
7.00 25.00
30.00
35.00
A: Incubation time 15.00 8.00
10.00 40.00
10.00 9.00 B: pH
C: Temperature
c d
Design-Expert® Software
Design-Expert® Software
Enzyme activity
Enzyme activity
94.428
94.428
24.034 24.034
95
95
X1 = A: Incubation time X1 = B: pH
X2 = D: Agitation X2 = C: Temperature 77
83
Enzyme activity
Actual Factors Actual Factors
Enzyme activity
41
59
47 23
0.00 5.00
30.00
40.00
25.00 25.00
6.00
35.00
20.00 50.00
7.00
30.00
75.00
A: Incubation time
15.00 D: Agitation
B: pH 8.00 25.00
10.00 100.00
9.00 20.00
C: Temperature
e f
Design-Expert® Software Design-Expert® Software
24.034 24.034
95
95
X1 = B: pH X1 = C: Temperature
X2 = D: Agitation X2 = D: Agitation 84
81.75
Actual Factors Actual Factors
Enzyme activity
Enzyme activity
62
55.25
51
42
100.00
100.00
40.00
5.00
75.00 75.00
6.00 35.00
50.00 50.00
7.00 30.00
Fig. 7 Surface plot and Contour plot for enzyme production. a Incubation time versus pH, b temperature versus incubation time, c agitation
versus incubation time, d pH versus temperature, e agitation versus pH, f agitation versus temperature
goodness of fit of the model was examined by determina- variables. The adjusted determination coefficient (Adj
tion coefficient (R2 = 0.978409) which implied that the R2 = 0.956817) was also satisfactory to confirm the sig-
sample variation of more than 97.1% was attributed to the nificance of the model (Table 4).
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Production, Optimization and Characterisation of Chitosanase of Bacillus sp. and its…
50
45
Enzyme Activity (U/ml)
40
35
30
25
20
15
10
5
0
4 5 6 7 8 9
pH
45
40
Enzyme Acvity (U/ml)
35
30
25
20
15
10
5
0
20 30 40 50 60 70
Temperature (OC)
Fig. 10 SDS-PAGE of crude chitosanase enzyme. a Molecular
Fig. 9 Chitosanase activity at various temperature marker, b crude chitosanase enzyme
In case of chitosanase enzyme production, the P value point of the corresponding contour plot. Each contour
for the model was found to be \ 0.0001 concluding that it curve represents an infinite number of combinations of the
was significant. The coefficient of variation of the model two tested variables, with the other two maintained at zero
was (CV = 5.889882%). The goodness of fit of the model levels [20]. Senthilkumar et al. [19] reported about the
was examined by determination coefficient production of Polyhydroxyalkanoates optimisation by
(R2 = 0.981455) which implied that the sample variation of Pseudomonas aeruginosa SU-1 using RSM as pH 8, tem-
more than 98.1% was attributed to the variables. The perature 40 C, and incubation time of 48 h. The maximum
adjusted determination coefficient (Adj R2 = 0.96291) was production of PHA with these optimized conditions was
also satisfactory to confirm the significance of the model found to be around 1.3 times higher than the normal
(Table 5). optimization method.
Response surface contours plots and three dimensional
graphs helps in understanding the type of interaction Characterization of Crude Enzyme
between test variables and to obtain the optimum condi-
tions [32, 33] (Figs. 6a–f, 7a–f). A total of six response Chitosanase Activity
surfaces were shown by considering all the possible com-
binations. A circular contour plot shows negligible inter- The optimum pH for chitosanase activity (crude) was
action between the independent variables used, while observed at pH 6 (Fig. 8). Chitosanase enzyme produced
perfect interaction indicates elliptical contours. The maxi- using Bacillus subtilis RKY3 also showed highest chi-
mum predicted value is represented by the surface confined tosanase activity at pH 6 [18]. Optimum temperature for
in the smallest ellipse in the contour diagram [34]. The chitosanase activity was found to be at 40 C (Fig. 9).
optimum value of each variable was identified based on the Similar results were found by Prakash and Gopal [35] with
hump in the three-dimensional plot, or from the central chitosanase of Bacillus cereus CH12.
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Antimicrobial Activity
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Compliance with Ethical Standards 13. Y. Sun, W. Liu, B. Han, J. Zhang, and B. Liu (2006). Biotechnol.
Lett. 28, 1393–1399.
Conflict of interest The authors declare no conflict of interest. 14. S. K. Hsu, Y. C. Chung, C. T. Chang, and H. Y. Sung (2012). J.
Agric. Food Chem. 60, 649–657.
15. S. L. Wang, W. N. Tseng, and T. W. Liang (2011). Biodegra-
dation 22, 939–948.
References 16. A. S. A. El-Saye, G. H. Rabie, N. S. El-Gazzar, and G. S. Ali
(2017). J. Nanomed. Nanotechnol. 8, 420.
1. S. S. Kumar, L. Kumar, V. Sahai, and R. Gupta (2009). J. Ind. 17. R. Singh, U. U. Shedbalkar, S. B. Nadhe, S. A. Wadhwani, and B.
Microbiol. Biotechnol. 36, 427. A. Chopade (2017). AMB Express. 7, 226.
2. S. S. Kumar, N. Arora, R. Bhatnagar, and R. Gupta (2009). J. 18. Y. J. Wee, L. V. Reddy, S. D. Yoon, and H. W. Ryu (2011). J.
Mol. Catal. B Enzymatic. 59, 41–46. Chem. Technol. Biotechnol. 86, 757–762.
3. R. Hamid, M. A. Khan, M. Ahmad, M. M. Ahmad, M. Z. Abdin, 19. P. Senthilkumar, S. S. Dawn, K. S. Samanvitha, S. S. Kumar, G.
J. Musarrat, and S. Javed (2013). J. Pharm. BioAllied Sci. 5, N. Kumar, and A. V. Samrot (2017). Biocatal. Agric. Biotechnol.
21–29. 12, 292–298.
4. A. Arafat, S. A. Samad, S. M. Masum, and M. Moniruzzaman 20. R. Vidhyalakshmi, V. C. Nachiyar, N. G. Kumar, and S. Sunkar
(2015). Int. J. Sci. Eng. Res. 6, (5), 538–541. (2016). Int. J. Biol. Macromol. 87, 405–414.
5. L. A. Rabea, M. E. T. Badawy, C. V. Stevens, G. Smagghe, and 21. N. Gopakumaran, S. G. Veerasangili, and T. P. Valliaparambal
W. Steurbaut (2003). Biomacromolecules 4, 1457–1465. (2017). Jordan J. Biol. Sci 10, 221–227.
6. M. Nogawa, H. Takahashi, A. Kashiwagi, K. Ohshima, H. Okada, 22. U. K. Laemmli (1970). Nature 227, 680–685.
and Y. Morikawa (1998). Appl. Environ. Microbiol. 64, 890–895. 23. D. A. Hager and R. R. Burgess (1980). Anal. Biochem. 109,
7. W. J. Jung, J. H. Kuk, K. Y. Kim, K. C. Jung, and R. D. Park 76–86.
(2006). Protein Exp. Purif. 45, 125–131. 24. A. Farouk (1982). Pharmaceutics 12, 295–298.
8. L. C. A. Silva, T. L. Honorato, T. T. Franco, and S. Rodrigues 25. L. Lillo, J. Alarcón, and G. Cabello (2008). Z. Naturforsch C 63,
(2012). Food Bioprocess. Technol. 5, 1564–1572. 644–648.
9. I. Boucher, A. Dupuy, P. Vidal, W. A. Neugebauer, and R. 26. S. N. Kharat and V. D. Mendhulkar (2016). Mater. Sci. Eng. C
Brzezinski (1992). Appl. Microbiol. Biotechnol. 38, 188–193. 62, 719–724.
10. E. S. A. El-Sherbiny (2011). Asian J. Biol. Sci. 4, 15–24. 27. A. V. Samrot, P. Raji, A. J. Selvarani, and P. Nishanthini (2018).
11. A. Pelletier and J. Sygusch (1990). Appl. Environ. Microbiol. 56, Biocatal. Agric. Biotechnol. 16, 253–270.
844–848. 28. Z. A. Ali, R. Yahya, S. D. Sekaran, and R. Puteh (2016). Adv.
12. K. Akiyama, T. Fujita, K. Kuroshima, T. Sakane, T. Yokota, and Mater. Sci. Eng. Article ID 4102196.
R. Takata (1999). J. Biosci. Bioeng. 87, 383–385. 29. P. Logeswari, S. Silambarasan, and J. Abraham (2015). J. Saudi
Chem. Soc. 19, 311–317.
123
A. V. Samrot et al.
30. C. O’May and N. Tufenkji (2011). Appl. Environ. Microbiol. 77, 37. J. C. Fernandes, F. K. Tavaria, J. C. Soares, O. S. Ramos, J.
3061–3067. M. Monteiro, M. E. Pintado, and X. F. Malcata (2008). Food
31. J. Tremblay, A. P. Richardson, F. Lepine, and E. Deziel (2007). Microbiol. 25, 922–928.
Environ. Microbiol. 9, 2622–2630. 38. P. M. Gopinath, A. Ranjani, D. Dhanasekaran, N. Thajuddin, G.
32. P. D. Haaland Separating Signals from the Noise. Experimental Archunan, M. A. Akbarsha, B. Gulyás, and P. Padmanabhan
Design in Biotechnology (Marcel Dekker, New York, 1989), (2016). Sci. Rep. 6, 34058. https://doi.org/10.1038/srep34058.
pp. 61–83. 39. P. Senthilkumar, S. Rashmitha, P. Veera, C. V. Ignatious, C.
33. R. H. Myers and D. Contgomery Surface Methodology: Process SaiPriya, A. V. Samrot (2018). J. Pure Appl. Microbiol. 12(02).
and Product Optimization Using Designed Experiments, 1st ed 40. A. V. Samrot, N. Shobana, and R. Jenna (2018). Bionanoscience
(Wiley, New York, 1995). 8, 632–646. https://doi.org/10.1007/s12668-018-0521-8.
34. R. V. Muralidhar, R. R. Chirumamila, R. Marchant, S. N. Nee,
and P. Poonam (2001). Biochem. Eng. J. 9, 17–23. Publisher’s Note Springer Nature remains neutral with regard to
35. N. Prakash and S. Gopal (2017). IIOAB J. 8, 1–6. jurisdictional claims in published maps and institutional affiliations.
36. M. A. Kassem, N. Eltoukhy, R. Abdelnabi, N. Fanaki, and H.
Abou-Shleib (2013). N. Egypt. J. Microbiol. 36, 177–197.
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