Sop-Clinical Pathology
Sop-Clinical Pathology
Sop-Clinical Pathology
STANDARD OPERATING
PROCEDURE
(CLINICAL PATHOLOGY)
TABLE OF CONTENT
LAST
SL REVISION
TITLE REVISION PAGE NO
NO NO
MADE
Sputum Routine
3 00 00 13 – 14
Examination
6 Semen Analysis 00 00 19 – 21
(i)Manual: Barium chloride is used to precipitate the sulphates in the urine. Any
bilirubin present becomes attached to the precipitated barium sulphate. When
Fouchet’s reagent is added to the precipitate, the Ferric chloride oxydises the
Bilirubin to green blue coloured biliverdin.
(ii)Dipstick: Is based on the coupling of Bilirubin 2, 4 – dichlorobenzene –diazonium
fluroborate in an acidic medium. The colour ranges from tan to orangish when
no bilirubin is present through various shades of tan to reddish brown with
increasing levels of bilirubin.
Bilirubin : For Bile Salt
i) Bile Salt – add a pinch of sulphur power to urine in a test tube, if it sinks
record as positive and if it floats record as negative.
e) Urobilinogen :
(i)Manual:Urobilinogen reacts with p-dimethylaminobenzaldehyde to form a
red condensation product. The intensity of the colour produced
corresponds to the concentration of Urobilinogen present.
Issue No. 04 Issue Date: 09.03.2020 Copy Page 7 of 23
Prepared By: No.
Rev. No.: 00 Rev. Date: Nil
Issued By:
Approved By:
R.K.Life Services Pvt.Ltd.
(Department of Laboratory Medicine)
Doc No. RKLS/SOP/02 SOP FOR CLINICAL PATHOLOGY
f) Hemoglobin :
(i)Dipstick:The test is based on the ability of hemoglobin to catalyze the
oxidation of colour indicator (tetramethylbenzidine) by an organic peroxide to
produce a colour ranging from greenish-yellow through bluish-green to dark
blue. Intact erythrocytes hemolysed on the test pad liberate hemoglobin and
produce blue-green dots on a yellow background.
g) Specific Gravity :
(i)Dipstick: The test pad contains two indicators, methyl red and bromothymol blue,
which give color changes ranging from blue-green to orange with increasing
ionic concentration. The strip specific gravity test does not indicate the amount
of non-ionic urinary constituents present such as urea, creatinine, or glucose.
h) pH :
(i)Dipstick: The test is based on the double indicators (methyl red and bromothymol blue)
which give colours ranging from red orange through green to blue overing the
urinary pH range of 5-9.
3. Performance specifications
Being a qualitative test these have not been worked out.
7. Calibration procedure
Centrifuge and Urinometer is calibrated as per NABL norms.
8. Procedural Steps
Issue No. 04 Issue Date: 09.03.2020 Copy Page 7 of 23
Prepared By: No.
Rev. No.: 00 Rev. Date: Nil
Issued By:
Approved By:
R.K.Life Services Pvt.Ltd.
(Department of Laboratory Medicine)
Doc No. RKLS/SOP/02 SOP FOR CLINICAL PATHOLOGY
The sample is received and properly labeled bearing name and ID number and test
to be performed.
It is then transported to the Clinical Pathology Lab. The responsibility lies with the
reception. A test slip is generated and sent along with the specimen.
Technician/Assistant perform the following test :-
A number is assigned to each sample which also written on the test slip.
Colour :
The colour is recorded with following shades
(i) Colour less
(ii) Straw
(iii) Pale yellow
(iv) Yellow
(v) Deep orange
(vi) Red
(vii) Reddish
In the event the colour being different from the shades noted above, the Pathologist
should be consulted.
Appearance :
It is recorded as (i) Clear (ii) Turbid (iii) Smokey
Quantity :
The amount received is noted in ml. (an approximate figure is sufficient)
The sample is well mixed and 10ml labeled Centrifuge tube is filled with urine and it is
spun at 1800rpm for 3 minutes. The supernatant is poured into another similarly labeled
tube.
A dip stick (Multistix) is dipped into the tube containing the supernatant and the
following parameters are recorded :
i) Reaction – is noted as Acidic or Alkaline
ii) Albumin – is noted as nil, trace, +, ++, +++, ++++.
iii) Sugar – is recorded as nil, trace, +, ++, +++, ++++.
iv) Ketones/Acetone – is recorded nil, trace, +, ++, +++.
v) Bile Pigments – is recorded as absent or present.
vi) Urobilinogen – is recorded as nil, +, ++, +++.
vii) Occult Blood – is recorded as nil, trace, +, ++, +++.
Cross Checks :
(i) In case the urine is deep yellow and the bile pigment is negative then the following tests
is to be done.
5ml of urine is added to 10ml of 10% Barium Chloride in a test tube. The precipitate is
collected in a filter paper by allowing the solution to pass through the filter paper. One or
two drops of Fouchet’s reagent is added to the filter paper, if green colour appears it is
recorded as positive.
Microscopic Examination :
The deposit in the Centrifuge tube is placed on an appropriately labeled slide and
covered with a cover slip, the slides and the test slip is given to the pathologist for
microscopic examination.
The slide is to be examined under 40X lens and record as below the following:
Red Blood Cell, Epithelial Cells, Pus Cells – These are recorded as number per high
power field as (a) Occasional – if less than 1/hpf, (b) In number/hpf and (c) Plenty – if
the number cannot be counted.
Record presence or absence of crystals with type.
Crystals are of following types. Only Cystine, Uric acid, Leucine and tyrosine crystals
are clinically significant.
Casts is recorded in number/hpf with type.
Yeast cells, bacteria, flagellates, spermatozoa etc. is recorded, if seen.
The data is entered in Test Slip and send for typing.
a) Liquicheck Urinanalysis control level 1 & 2 from BioRad is checked daily for internal
quality control.
b) Inter laboratory comparison is done with 2 NABL accredited laboratory once in 6
months.
10. Interferences
a) Protein :
(i) Dipstick: Dipstick test for protein may show false positive result if urine is
contaminated with disinfectants containing quarternary ammonium
compounds or chlorhexidine.
(ii) Strong alkaline urine may give false positive results.
(iii)Contamination with vaginal or urethral secretions may give false positive
results.
(iv) After infusion of plasma expanders like polyvinyl, pyrolidone.
b) Glucose :
(i) Oxygen receptors in urine like ascorbic acid and acetoacetic acid can give false
positive results.
(ii) Catalase will present in high concentration in the urine with E.coli infections and
can destroy H2O2 resulting in false negative results.
(iii) Disinfectants such as bleach can oxidize the chromogen directly giving false
positive reaction.
c) Ketones : High specific gravity or low pH urine may give false trace positive
reaction.
d) Bilirubin :
(i) If urine has very high level of ascorbic acid false negative result may be seen.
(ii) Beet root dye can interfere with this reaction. This dye becomes colourless in
alkaline urine.
(iii) Certain drugs can colour the urine deep orange resulting in interference.
e) Urobilinogen :
(i) Reaction with porphobilinogen is late.
(ii) With phenzaopyridine (found in some disinfectants) a rapid red colour is
found.
f) Hemoglobin : False positive reaction can result from the presence of contaminating
oxidizing detergents like bleach.
REFRENCES:
i. Kaplan, L.A. and Pesce, A.J., Clinical Chemistry Theory Analysis and Correlation.
C.V.Mosby: 1004-1007; 1984.
ii. Brunzel, N.A., Fundamentals of Urine and Body Fluid Analysis. Philadelphia: Saunders;
1994.
iii. Graff, L.A., Handbook of Routine Urinalysis. Philadelphia: J. B .Lippincott Co.;1983.
iv. Jungreis, E., Spot Test Analysis. New York: John Willey & Sons; 1985.
v. Henry, J. B. et Al., Clinical Diagnosis and Management of Laboratory Methods, 18 th ed.
Philadelphia: Saunders; 1991.
vi. Scheer, W. D., American Journal of Clinical Pathology, 87: 86-93, 1987.
vii. Urinalysis and Collection, Transportation, and preservation of Urine Specimens; Approved
Guideline-Second Edition, GP 16-A2, Vol.21 No. 19, NNCCLS.
viii. Hepler, O.E., Manual of Clinical Laboratory Methods, 4th ed. Illinois: Thomas Books;
1. Purpose of examination
Physical, chemical and microscopic examination of the stool to include the following :
a) Colour
b) Consistency
c) Mucus
d) Blood
e) Reaction
f) Occult Blood
g) Reducing substances
h) Microscopic examination
3. Performance specifications
None.
7. Calibration procedure
Issue No. 04 Issue Date: 09.03.2020 Copy Page 7 of 23
Prepared By: No.
Rev. No.: 00 Rev. Date: Nil
Issued By:
Approved By:
R.K.Life Services Pvt.Ltd.
(Department of Laboratory Medicine)
Doc No. RKLS/SOP/02 SOP FOR CLINICAL PATHOLOGY
None.
8. Procedural Steps
The sample is received at the reception desk. The container is checked and labeled with
name, ID number and test to be performed. The sample is then transferred to Clinical
Pathology Section for testing. The test procedure describe below is to be performed by
Assistant Technician.
a) Physical Examination –
b) Chemical Examination :
pH and reaction – pH is tested by smearing a thin layer of stool on the pH paper or litmus
paper and read using comparative strips for pH and the colour change
from blue to red or red to blue of litmus paper is recorded. Red
Litmus Paper to Blue – Alkaline and Blue to Red is acidic. No change
is recorded as neutral.
Reducing Substances – 8 drops of liquid stool or equivalent is added to 5ml benedict’s
reagent and boiled and then cooled. Yellow green to orange colour
indicates positive results and is recorded as such. No change in colour
is recorded as negative.
Range : It will detect approximately 10mg occult blood per 100ml. It is not specific for
hemoglobin.
Reagents : Hemospot: A Two filed test for occult blood in stool done by the standard
GUAIAC method.
Principle: If blood is present in stool the haematin in the hemoglobin molecule catalyses the
release of oxygen from the H2O2 which in turn oxidizes the colourless phenolic
components of gum GUAIAC to coloured quinones.During test, After the
addition of developer solution to the reactive surfaces of the result window, the
Issue No. 04 Issue Date: 09.03.2020 Copy Page 7 of 23
Prepared By: No.
Rev. No.: 00 Rev. Date: Nil
Issued By:
Approved By:
R.K.Life Services Pvt.Ltd.
(Department of Laboratory Medicine)
Doc No. RKLS/SOP/02 SOP FOR CLINICAL PATHOLOGY
reaction area turns blue if occult blood is present in the sample. If there is no
change in colour it indicates a negative result.
Procedure : Spread small amount of stool on the test card sample application window A &
B. Dry it. Turn the card, add developer solution to both windows and observe
colour change after two minutes.
The microscopic examination is done by the pathologist and the following parameters are
recorded :
10. Interferences
None vegetarian diet and iron containing medicine can give false positive results.
REFERENCES:
i. Knight et. al. (1989) Occult Blood Screening for colorectal cancer. JAMA, vol261, No.4, 587-
593.
ii. Rockey D et. al. (1998) Relative Frequency of Upper gastrointestinal and colonic lesions in
patients with positive occult blood tests. N Engl J Med 339; 153-159.
iii. Morris, W.D. et al (1976) Reliability of chemical tests for fecal occult blood in hospitalized
patients. Digestive diseases vol 21, No.10, 845-852.
iv. Ostrow J. D. et al (1973) Sensitivity and reproducibility of chemical tests for fecal occult
blood with an emphasis on false positive reactions. Digestive diseases vol 18, No. 11, 932-939.
1. Purpose of examination
Microscopic and Macroscopic examination of Sputum.
3. Performance specifications
None.
7. Calibration procedure
None.
8. Procedural Steps
The sample is received by the reception and labeled bearing the name, ID number and
name of the test. It is sent to clinical pathology lab. Following things are recorded.
a) Colour
b) Consistency
c) Odour
d) Presence or absence of the following is noted –
(i) Cheesy masses – Fragment of necrotic lung tissue.
(ii) Dittrichs Plugs – Are plugs from bronchi/bronchioles consisting of cellular
debris, fat and bacteria seen in bronchieactasis.
(iii) Curschmanns Spirals – These are twisted mucoid strands enclosing epithelial
cells, eosinophils and charcot leyden crystals.
(iv) Casts – Bronchial casts are molded in the bronchial and consist of fibrin and
mucin.
e) Makes smear of the sputum with wire loop on clean glass slides. Flame it to fix the
smears. Stain with the following stains :
(i) MGG/Lieshman
(ii) Gram Stain
(iii) Z.N. Stain
Issue No. 04 Issue Date: 09.03.2020 Copy Page 7 of 23
Prepared By: No.
Rev. No.: 00 Rev. Date: Nil
Issued By:
Approved By:
R.K.Life Services Pvt.Ltd.
(Department of Laboratory Medicine)
Doc No. RKLS/SOP/02 SOP FOR CLINICAL PATHOLOGY
Look under the oil emersion lens and record the following :
(i) Epithelial Cells
(ii) Inflammatory Cells
(iii) Red Blood Cells
(iv) Charcol Leyden Crystals – These are derived from eosinophils and are
hexagonal slender crystals with pointed ends.
(v) Elastic Fibres
(vi) Micro Organism (Bacteria)
(vii) Fungi
(viii) Acid Fast Bacilli
Record the above on test slip and send for typing.
10. Interferences
Contamination with saliva.
18. Reference: O.E Hepler. Manual of Clinical Laboratory Methods. Pg No 146, 147, 149
1. Purpose of examination
Estimation of total number of cells in (a) CSF (b) Peritoneal fluid (c) Pleural fluid and (d)
Synovial fluid
3. Performance specifications
CV% 8.2 and range upto 100000/cmm.
7. Calibration procedure
None.
8. Procedural Steps
10. Interferences
a) Clots
b) Hemolysis
Issue No. 04 Issue Date: 09.03.2020 Copy Page 7 of 23
Prepared By: No.
Rev. No.: 00 Rev. Date: Nil
Issued By:
Approved By:
R.K.Life Services Pvt.Ltd.
(Department of Laboratory Medicine)
Doc No. RKLS/SOP/02 SOP FOR CLINICAL PATHOLOGY
One big square of Neubar’s chamber measures 1 x 1mm and the depth is 0.1mm.
18. Reference: O.E Hepler. Manual of Clinical Laboratory Methods. Pg No 150, 151, 152.
1. Purpose of examination
Detection of Bence Jones Protein in urine.
3. Performance specifications
None.
7. Calibration procedure
Thermometer is calibrated.
8. Procedural Steps
Urine is received and properly labeled and send to clinical pathology laboratory.
Place a 250ml Beaker, half full with water on a Tripod and place a tube
containing the urine sample to be tested.
Place a thermometer in the Beaker. Heat to raise the temperature to 50 to 600C.
Look for turbidity in the urine at 50 to 600C.
If turbidity appears continue heating till 90 to 100 0C when turbidity should
disappear.
Allow the water to cool, turbidity will reappear on cooling to 600C.
10. Interferences
This test is relatively insensitive and requires minimum 150 mg/dl of Bence Jones
Protein.
1. Purpose of examination
Analysis of Semen to include :
a) Volume
b) pH
c) Liquefaction time
d) Sperm count
e) Motility
f) Morphology
3. Performance specifications
Not possible.
7. Calibration procedure
Pipettes are calibrated as per NABL norms.
8. Procedural Steps
10. Interferences
a) Improper collection
b) Part of the specimen lost during collection
c) Condom collection
Purpose :
Total protein in 24 hours urine.
Performance Specification :
Total protein in 24 hours urine by Esbach’s method.
Primary Sample :
24 hours urine is used , preserved with Thymol crystal.
Enviromental Condition :
At room temp.
References :
Issue No. 04 Issue Date: 09.03.2020 Copy Page 7 of 23
Prepared By: No.
Rev. No.: 00 Rev. Date: Nil
Issued By:
Approved By:
R.K.Life Services Pvt.Ltd.
(Department of Laboratory Medicine)
Doc No. RKLS/SOP/02 SOP FOR CLINICAL PATHOLOGY
Hepler, O.E., Manual of Clinical Laboratory Methods, 4th ed. Illinois: Thomas Books
Section --A
QUALITY CONTROL PROCEDURE
B. Correlations of results:
Correlation is done with different parameters, which is documented.
Section --B
SAFETY AND PRECAUTIONS