Organic Chemistry: DR Kennedy Ngwira DR Maya Makatini Prof Amanda Rousseau
Organic Chemistry: DR Kennedy Ngwira DR Maya Makatini Prof Amanda Rousseau
Dr Kennedy Ngwira
Dr Maya Makatini
Prof Amanda Rousseau
No unused electrons
No unused orbitals
No “reactive spots”
O14: Unique Properties of Carbon
The carbon atom is small,
and it is screened by the
other atoms attached to it
and therefore it is difficult
to attack at the carbon
centre (in order to react
with the carbon).
O14: Unique Properties of Carbon
Reactivity
Buckyballs
a)
b)
c)
O15: Organic Reactions
Link between structural features and reaction
type
only σ-bonds
(+H2O)
π-bond
O15: Organic Reactions
Reaction Pathways
Substrates [Intermediates] Products
Substitution Elimination
O18: Halogenation of Methane
Radical Reaction
These reactions don’t use nucleophiles or electrophiles,
but instead they use “free radicals” which have unpaired
electrons. Both reactants donate one electron to form
the new bond. E.g. H Cl
Substitution
e.g. CH4 + Cl2 CH3-Cl
CH3-Cl + Cl2 CH2-Cl2
CHCl3
CCl4
These reactions are difficult to control and therefore
there are mixtures of products.
O18: Halogenation of Methane
Radical Reaction
(Small %) Initiation
Homolytic cleavage
Propagation
Propagation
2. Halogenation
MINOR PRODUCT
MAJOR PRODUCT
CH3 H H H
+ + + +
H 3C C CH3 H3C C CH3 H 3C C H H C H
Increasing Stability
MAJOR MINOR
When there is a halogen already attached to the alkene, the 2nd halide
ion will add to the same position (the side with fewer hydrogens).
O21:Chemistry of benzene
Benzene
A special type of unsaturated compound: C6H6
Resonance forms
Evidence: All the C-C bonds in benzene are the same
length and strength!
Nucleophile
TNT
O21:Chemistry of benzene
Electrophilic Substitution Reactions, eg.
2. Halogenation
O21:Chemistry of benzene
Electrophilic Substitution Reactions, eg.
3. Alkylation (Friedel-Crafts)
4. Acylation (Friedel-Crafts)
O22:Comparison of reactions
Alkanes: Substitution reaction, radical mechanism
Nucleophile
O22:Comparison of reactions
Example: Indicate the reagent and/or catalyst
required for the following transformations:
O23: Saturated Heteroatom Compounds
Overview of Reactivity
Types of saturated heteroatom compounds:
1) Haloalkanes (Substitution vs Elimination)
2) Alcohols (Substitution, Dehydration, Oxidation)
3) Ethers
4) Amines
5) Organometallics
• Ease of reactions (effect of nucleophile, leaving group,
electrophile, acid)
• Comparison with inorganics (water and ammonia)
• Acid-Base properties
O23: Saturated Heteroatom Compounds
Reactivity of C-X
Electrophilic C Nucleophilic C
Haloalkanes
Organometallics
Alcohols
Ethers
Amines
O24: Comparison with inorganics
2) Size effects:
Substitution is favoured for small nucleophiles - attack
the carbon (inside the molecule).
Why?
MINOR
MAJOR
O26: Elimination
ALCOHOLS: Alternative eliminations
“work-up”
O28: Unsaturated Heteroatom compounds
Reactions with good nucleophiles, eg:
OR
O28: Unsaturated Heteroatom compounds
Acid-catalysed additions
O28: Unsaturated Heteroatom compounds
Nucleophilic addition
• Nucleophile can be neutral (H2O, R-OH, NH3), which
usually requires acid catalysis.
• Nucleophile can be negatively charged [OH-, NC-, H-,
R3C- (carbanion)] -doesn’t require acid catalysis.
Oxidation reactions
• Aldehydes are easily oxidized to carboxylic acids
• Ketones resist oxidation
Reduction reactions
• Both aldehydes and ketones are reduced to alcohols
when hydrogen adds to the carbonyl group
• Typical reducing agents include LiAlH4, NaBH4.
O29: Comparing addition reactions
Adding Hydrogen, H2
H2
H H
metal surface
Ester
Acid Chloride
Amide
O30: Composite functional groups
Reactions of Composite Functional Groups
The double bond leads us to predict an addition reaction.
The heteroatom leads us to predict a substitution or
elimination.
Remember addition + elimination = substitution, so
overall we see a substitution reaction.
Substitution reaction
Substitution reaction
O30: Composite functional groups
Reactions of Composite Functional Groups
Mechanism:
substitution
Addition plus
elimination =
substitution
H O H O
N H + H O C N C + H O H
X X Y Y
(-XY)
X Y
O32: Modern Materials
Condensation Polymers
Eg. Nylon 6,6 is a polyamide
O32: Modern Materials
Condensation Polymers (eg. polyester)
repeat unit
O32: Modern Materials
Addition Polymers
Example: ethylene H2C=CH2, can polymerise by using
electrons from the C–C bond to form C–C bonds with
adjacent ethylene molecules (with the help of radicals).
See earlier!
Monomer Polymer
n > 106
O32: Modern Materials
Addition Polymers
Eg. Polystyrene
repeating unit
O32: Modern Materials
Addition Polymers
Eg. Polyvinyl chloride (PVC)
X=H polyethylene
X=CH3 polypropylene
X=Cl polyvinylchloride (PVC)
X=benzene polystyrene
X= -OCOCH3 polyvinylacetate (PVA)
X= CN Orlon
F2C=CF2 Teflon
CH2=C(CH3)CO2CH3 Perspex
O33: The Molecules of Life
We are going to look at five classes of biological
molecules:
Lipids
Steroids
O34 & O35: Amino Acids
• There are 20 naturally occurring amino acids that are
used by the body to make proteins
• Amino acids contain an amine, a carboxylic acid and
an R group side chain
• Have a stereogenic centre
1. Acidic
2. Basic
3. Hydrophobic (non-polar)
4. Hydrophilic (polar) α-amino acid
O34 & O35: Amino Acids
1) Acidic amino acid (e.g. aspartic acid)
Enzyme catalysis
O34 & O35: Amino Acids and Proteins
Show the amino acids that would form on hydrolysis of the
following tripeptide:
O34 & O35: Amino Acids and Proteins
Protein Structure
The sequence of amino acids that make up the protein is
known as the primary structure of the protein.
Sucrose (a dimer of
glucose and fructose)
amylopectin
amylose
C
D
A
B
cholesterol testosterone
oestrone oestradiol