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@BojarLab

BojarLab

Machine Learning in Glycobiology and Systems Biology

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  1. glycowork glycowork Public

    Package for processing and analyzing glycans and their role in biology.

    Jupyter Notebook 57 13

  2. CandyCrunch CandyCrunch Public

    Predicting glycan structure from LC-MS/MS data

    Jupyter Notebook 22 6

Repositories

Showing 8 of 8 repositories
  • glycowork Public

    Package for processing and analyzing glycans and their role in biology.

    BojarLab/glycowork’s past year of commit activity
    Jupyter Notebook 57 MIT 13 0 0 Updated Jan 24, 2025
  • CandyCrunch Public

    Predicting glycan structure from LC-MS/MS data

    BojarLab/CandyCrunch’s past year of commit activity
    Jupyter Notebook 22 MIT 6 1 0 Updated Jan 22, 2025
  • FragmentFactory Public

    Devising human interpretable diagnostic glycan fragments

    BojarLab/FragmentFactory’s past year of commit activity
    Python 1 0 1 0 Updated Jan 21, 2025
  • GIFFLAR Public

    Glycan Informed Foundational Framework for Learning Abstract Representations, based on Combinatorial Complexes and Heterogeneous GNNs

    BojarLab/GIFFLAR’s past year of commit activity
    Python 3 0 0 0 Updated Jan 2, 2025
  • MilkGlycans Public archive

    Code and data for constructing and analyzing biosynthetic networks from free milk oligosaccharides

    BojarLab/MilkGlycans’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jun 8, 2023
  • scGlycomics_b16_branching Public

    Predicting single-cell glycosylation features from scRNA-seq

    BojarLab/scGlycomics_b16_branching’s past year of commit activity
    Jupyter Notebook 0 MIT 2 0 0 Updated Jul 7, 2022
  • LectinOracle Public archive

    Deep learning model to predict interactions between proteins and glycans [LEGACY; use glycowork implementation]

    BojarLab/LectinOracle’s past year of commit activity
    Jupyter Notebook 9 MIT 4 0 0 Updated Aug 16, 2021
  • SweetNet Public archive

    Graph convolutional neural networks for analyzing glycans [LEGACY; use glycowork implementation]

    BojarLab/SweetNet’s past year of commit activity
    Jupyter Notebook 18 MIT 6 1 0 Updated Mar 9, 2021

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