md_harmonize

md_harmonize package provides facilities for creation and harmonization of compounds and reactions.

Citation

Please cite the GitHub repository until our manuscript is accepted for publication: https://github.com/MoseleyBioinformaticsLab/md_harmonize.git

Installation

md_harmonize runs under Python 3.7+ and is available through python3-pip. Install via pip or clone the git repo and install the following dependencies and you are ready to go!

Install on Linux

Pip installation

python3 -m pip install md-harmonize

Note:

Please add ~/.local/bin/ to the environmental PATH variant in bash_profile if you install the package with --user.

python3-devel is required for package installation.

GitHub Package installation

git clone git@github.com:MoseleyBioinformaticsLab/md_harmonize.git

License

Made available under the terms of The modified Clear BSD License. See full license in LICENSE.

Authors

• Huan Jin
• Hunter N.B. Moseley