Rapid Viral Variant Exploration and Detection - Interactive WebApp

An interactive graphical user interface for visualizing mutation tree cohorts.

VILOCA: VIral LOcal haplotype reconstruction and mutation CAlling for short and long read data

BSSE COVID-19 sequencing of test swab samples

V-pipe is a pipeline designed for analysing NGS data of short viral genomes

Procedure used for the surveillance of SARS-CoV-2, RSV and Influenza genomic variants in wastewater.

Wrangling short-read sequencing data for import into SILO

Probabilistic modeling of high-dimensional binary data in JAX

WISE Loculus with V-Pipe – Infra for start-to-end viral wastewater analysis.