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1. iqtk iqtk Public

   Forked from iqtk/iqtk

   The Inquiry Toolkit is a full stack of open-source data infrastructure components for reproducible scientific research.

   HTML

2. lxy lxy Public

   Genome scaffolding and phasing with Hi-C using a genetic algorithm approach.

   Go 1

3. pcompile pcompile Public

   A prototype framework for expressing automated laboratory protocols originally targeting the Transcriptic API

   Python 1

4. tracer tracer Public

   Tracer is a codebase for prototyping the use of a deep LSTM model for translating SMRT sequencing traces to DNA string sequences (or "base calling").

   Python 2 4

5. ds ds Public

   A merry journey through various data structures in Golang.

   Go

6. proxmine proxmine Public

   Code supporting Beitel et al. (2014) regarding strain- and plasmid-level metagenome deconvolution using high-throughput chromosome conformation capture.

   R