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@hms-dbmi

Harvard Medical School - Department of Biomedical Informatics

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  1. UpSetR UpSetR Public

    An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

    R 794 160

  2. scde scde Public

    R package for analyzing single-cell RNA-seq data

    R 175 66

  3. viv viv Public

    Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

    JavaScript 310 49

Repositories

Showing 10 of 374 repositories
  • PIC-SURE-Frontend Public

    A frontend for the PIC-SURE API

    hms-dbmi/PIC-SURE-Frontend’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 7 Updated May 20, 2025
  • i2b2v2-webclient Public
    hms-dbmi/i2b2v2-webclient’s past year of commit activity
    JavaScript 2 4 1 0 Updated May 20, 2025
  • picsure-dictionary Public Forked from Luke-Sikina/picsure-search-refinement
    hms-dbmi/picsure-dictionary’s past year of commit activity
    Java 0 Apache-2.0 1 0 0 Updated May 20, 2025
  • pic-sure-bdc-release-control Public
    hms-dbmi/pic-sure-bdc-release-control’s past year of commit activity
    1 Apache-2.0 8 0 0 Updated May 20, 2025
  • DQVis-Generation Public

    code for generating training data used for fine-tuning the LLM

    hms-dbmi/DQVis-Generation’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 1 Updated May 20, 2025
  • DQVis-review Public Forked from hms-dbmi/udi-grammar

    For reviewing the generated datasets.

    hms-dbmi/DQVis-review’s past year of commit activity
    Vue 1 MIT 1 0 1 Updated May 20, 2025
  • pic-sure-services Public
    hms-dbmi/pic-sure-services’s past year of commit activity
    Java 0 Apache-2.0 0 0 0 Updated May 20, 2025
  • ETLToolSuite-EntityGenerator Public

    This tool will generate Entity Files that can be used to load into Datasources.

    hms-dbmi/ETLToolSuite-EntityGenerator’s past year of commit activity
    Java 0 Apache-2.0 1 0 0 Updated May 20, 2025
  • pic-sure-gic-institution-release-control Public
    hms-dbmi/pic-sure-gic-institution-release-control’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated May 20, 2025
  • PIC-SURE-Migrations Public

    Database migrations for the PIC-SURE All-in-One.

    hms-dbmi/PIC-SURE-Migrations’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated May 19, 2025
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