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researcher, entrepreneur, engineer
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researcher, entrepreneur, engineer

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  1. cantinilab/scPRINT cantinilab/scPRINT Public

    Forked from jkobject/scPRINT

    single cell foundation model for Gene network inference and more

    Jupyter Notebook 80 11

  2. scDataLoader scDataLoader Public

    a dataloader to work with large single cell datasets from lamindb

    Jupyter Notebook 26 5

  3. broadinstitute/depmap_omics broadinstitute/depmap_omics Public

    What you need to process the Quarterly DepMap-Omics releases from Terra

    HTML 116 22

  4. broadinstitute/genepy broadinstitute/genepy Public

    Forked from jkobject/genepy

    Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python

    Python 20 5

  5. flatironinstitute/CaImAn flatironinstitute/CaImAn Public

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    Python 663 382

  6. broadinstitute/celligner broadinstitute/celligner Public

    tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.

    Jupyter Notebook 11 7

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