bedops

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🔬 BEDOPS: high-performance genomic feature operations

c c-plus-plus set bioinformatics compression pipeline genomics toolkit conversion parallel set-theory bed bedops

gia: Genomic Interval Arithmetic

genomics set-theory bedops bedtools intervals set-operations

Scripts to map conservation scores (phastcons/phylop) to the regions of interest

bedops conservation-scores phastcons phylop

Build a list of high-scoring, non-overlapping intervals using sampling or scheduling methods

sample bioinformatics genome priority-queue bedops packing disjoint scheduling-algorithms

Filter lower-scoring, neighboring genomic intervals within a specified distance

set bioinformatics bed interval bedops set-operations

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