Biological Expression Language is a domain-specific language created by Dexter Pratt at Selventa for encoding qualitative causal, correlative, and associative relations between entities in biological knowledge graphs.
🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology
A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
Harmonizing pathway databases using Biological Expression Language (BEL)
A Bio2BEL package for integrating pathway-related information from KEGG in BEL
Generate dynamic structural causal models from biological knowledge graphs encoded in the Biological Expression Language (BEL)
Notebooks demonstrating the usage of PyBEL and PyBEL Tools
A Bio2BEL package for DrugBank (https://www.drugbank.ca)
A package for generating curation sheets for rationally enriching a BEL graph using INDRA and PyBEL
Integration of pathway-related information from Reactome in BEL
A PyBEL extension for analyzing BEL graphs
A Bio2BEL package for converting the Human Metabolite Database (HMDB) to BEL
NCBI PubChem to BEL
A BEL export of Hetionet (https://github.com/hetio/hetionet)
The community homepage for the Biological Expression Language (BEL)
An environment for curating, validating, and exploring knowledge assemblies encoded in BEL
Guidelines and procedures for curation (manual and semi-automated)
Curation of Neurodegeneration in Biological Expression Language (CONIB)
Integration of pathway-related information from WikiPathways in BEL
A Bio2BEL package for the Medical Subject Headings (MeSH; https://meshb.nlm.nih.gov)
Created by Dexter Pratt
Released 2012