Error in drawHeatmap function
0
0
Entering edit mode
Johanna • 0
@661e5212
Last seen 7 months ago
India

I am getting this error when using the drawHeatmap function in GeneOverlap package

library(GeneOverlap)
library(qusage)

gmt_file <-read.gmt("gene_sets.gmt")
length(gmt_file) # 8

output1 <- readRDS("Megena_AURORA/105samples_AUR_MEGENA.output1.RDS") 
module_output <- output1$module.output
modules <- module_output$modules 

gom.obj <- newGOM(modules,gmt_file,
                  genome.size=20000)
drawHeatmap(gom.obj)

drawHeatmap(gom.obj) Error in seq.default(min(x, na.rm = na.rm), max(x, na.rm = na.rm), length = breaks) : 'to' must be a finite number

sessionInfo( )

```

GeneOverlap heatmaps • 259 views
ADD COMMENT

Login before adding your answer.

Traffic: 865 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6
pFad - Phonifier reborn

Pfad - The Proxy pFad of © 2024 Garber Painting. All rights reserved.

Note: This service is not intended for secure transactions such as banking, social media, email, or purchasing. Use at your own risk. We assume no liability whatsoever for broken pages.


Alternative Proxies:

Alternative Proxy

pFad Proxy

pFad v3 Proxy

pFad v4 Proxy