Showing : installation • reset
0
votes
0
replies
306
views
News: Legacy Bioconductor Installation
Installation Bioconductor
8 months ago shepherl 4.1k
0
votes
1
reply
1.1k
views
DeSeq2 and GenomicRange installation possible conflict with bioconductor version 3.16?
DESeq2 version3.16 installation bioconductor GenomicRange
updated 2.1 years ago by 67k • written 2.1 years ago by • 0
0
votes
1
reply
841
views
Regarding Installation of GEOquery
BiocManager installation GEOquery
updated 2.5 years ago by ▴ 780 • written 2.5 years ago by • 0
0
votes
3
replies
3.9k
views
Can't Install ensembldb and EnsDb.Hsapiens.v86
installation EnsDb.Hsapiens.v86 Bioconductor package ensembldb
2.6 years ago elmfinds • 0
0
votes
1
reply
1.3k
views
Can´t install GenomicRanges and rtracklayer
rtracklayer GenomicRanges Installation
updated 2.6 years ago by 67k • written 2.6 years ago by • 0
0
votes
2
replies
1.5k
views
cannot install various functions in R
GRanges packages installation
updated 2.7 years ago by 4.1k • written 2.7 years ago by • 0
0
votes
3
replies
2.7k
views
More Bioconductor Package Installation Problems
package symlinks directories installation Dropbox
updated 2.8 years ago by 16k • written 2.8 years ago by ▴ 10
1
vote
6
replies
3.3k
views
Bioconductor installation problems
packages installation Bioconductor updating
updated 2.8 years ago by 700 • written 2.9 years ago by ▴ 10
1
vote
1
reply
1.3k
views
list installed packages
Installation
updated 2.9 years ago by 67k • written 2.9 years ago by • 0
11
votes
11
replies
16k
views
cannot install edgeR on M1 Mac
apple m1 installation silicon
updated 3.1 years ago by 52k • written 3.6 years ago by ▴ 90
1
vote
5
replies
4.0k
views
Problem with DESeq2 installation using in R 1.4.1717
DESeq2 Problem installation with
updated 3.5 years ago by ▴ 760 • written 3.5 years ago by • 0
1
vote
1
reply
4.6k
views
Installing hdf5r without admin access
hdf5r installation
updated 3.6 years ago by 16k • written 3.6 years ago by • 0
0
votes
1
reply
3.8k
views
BiocManager.rdb is corrupt
Installation
updated 3.6 years ago by 67k • written 3.6 years ago by • 0
2
votes
2
replies
3.5k
views
Unable to install packages on MacOS
macos installation
updated 3.7 years ago by ★ 4.0k • written 3.7 years ago by ▴ 10
2
votes
2
replies
2.3k
views
loading scran package
scran installation
4.0 years ago TJ • 0
2
votes
2
replies
1.4k
views
Feature request: Freezing Bioconductor packages to a specific date
installation time machine mran rspm
updated 4.4 years ago by 25k • written 4.4 years ago by ▴ 90
1
vote
3
replies
1.9k
views
unable to install DESeq2 there is no package called XML
deseq2 bioconductor windows xml installation
updated 4.5 years ago by 43k • written 4.5 years ago by • 0
0
votes
1
reply
2.2k
views
ensembldb package installation issue
ensembldb package installation BiocManager
updated 4.5 years ago by ★ 4.0k • written 4.5 years ago by • 0
3
votes
3
replies
1.7k
views
Incomplete Install of Bioconductor Packages
Installation Packages Missing
updated 4.5 years ago by 1.6k • written 4.7 years ago by ▴ 10
1
vote
3
replies
4.8k
views
installation failure with BiocManager (URL status was 'Couldn't resolve proxy name')
bioconductor installation proxy BiocManager
updated 4.6 years ago by 25k • written 4.6 years ago by • 0
2
votes
8
replies
3.1k
views
DelayedArray loading Warning causes stop in Bioconductor 3.12
DelayedArray warning installation
updated 4.6 years ago by 16k • written 4.6 years ago by ▴ 10
0
votes
1
reply
1.1k
views
Difficulty Installing Bioconductor
Installation
updated 4.7 years ago by 25k • written 4.7 years ago by • 0
1
vote
3
replies
5.0k
views
"Permission denied" when installing TCGAbiolinks and RTCGAToolbox
installation permission denied RTCGAToolbox TCGAbiolinks
4.7 years ago julia.tutzauer • 0
3
votes
4
replies
1.9k
views
Can't install packages on R or via Bioconductor
R installation packages annotatr biocmanager
4.8 years ago dakarai_esgdaille ▴ 10
0
votes
2
replies
1.3k
views
Problems while installing HTSeqGenie and gmapR
software error HTSeq installation
updated 4.9 years ago by 25k • written 4.9 years ago by • 0
0
votes
2
replies
1.5k
views
Unable to install package
packages installation GenomeGraphs
updated 5.0 years ago by 67k • written 5.0 years ago by • 0
5
votes
5
replies
1.2k
views
Installation: go to specific version of a package prompted
software error installation
updated 5.1 years ago by 67k • written 5.1 years ago by • 0
4
votes
5
replies
2.1k
views
Downgrading R to 3.6.0 version (GOseq problem)
goseq installation
5.1 years ago gdalsky ▴ 40
2
votes
2
replies
1.2k
views
How to write the installation section in the vignette of a package that has not been sent into Bioconductor yet
newpackage vignette installation
updated 5.3 years ago by 4.1k • written 5.3 years ago by ▴ 10
0
votes
6
replies
9.1k
views
Rhtslib - install error
Rhtslib installation error zlib
updated 5.4 years ago by • 0 • written 6.3 years ago by • 0
0
votes
3
replies
2.2k
views
Can't install Genesis
Genesis Installation
updated 5.5 years ago by ★ 6.6k • written 5.5 years ago by ▴ 10
1
vote
4
replies
2.1k
views
flowCore install missing a dependency?
flowCore Installation dependency
updated 5.7 years ago by ▴ 310 • written 5.7 years ago by ▴ 70
0
votes
1
reply
1.2k
views
ChemmineOB Installation RHEL
ChemmineOB Linux Installation
5.9 years ago jandrosavich • 0
0
votes
1
reply
1.2k
views
Error when install bioconductor on Mac 10.12 Sierra
installation
updated 6.2 years ago by 25k • written 6.2 years ago by • 0
1
vote
1
reply
1.2k
views
GenomicFeatures won't install for 3.8 release
installation biocmanager
updated 6.2 years ago by 4.1k • written 6.2 years ago by ▴ 90
0
votes
4
replies
1.7k
views
BiocManager::install() breaks; can't install bioc-devel
biocmanager installation
6.4 years ago Kyle Johnsen ▴ 30
0
votes
2
replies
10.0k
views
Is there a way to specify where BiocInstaller will install packages similar to the "lib=...." for install.packages?
biocinstaller custom library path installation package installation
updated 6.4 years ago by 67k • written 6.4 years ago by ▴ 20
0
votes
1
reply
1.3k
views
DelayedArray install fails to UNC path
delayedarray bug installation
updated 6.5 years ago by 25k • written 6.6 years ago by • 0
0
votes
1
reply
1.9k
views
install ChAMP under Ubuntu 18.04 in R 3.4.4 with error "maximal number of DLLs reached..."
ChAMP software error installation
6.6 years ago chxp • 0
0
votes
3
replies
2.4k
views
Dependency installation error due to no longer available CRAN packages ('rngtools', 'pkgmaker')
installation minfi bumphunter
updated 6.7 years ago by ▴ 750 • written 6.7 years ago by • 0
0
votes
2
replies
2.4k
views
reactome.db install problem
installation
6.7 years ago xinfu.xia • 0
2
votes
3
replies
1.4k
views
Cannot install Rhtslib on Mac OS 10.13
rhstlib installation compilation error
6.8 years ago Ryan C. Thompson ★ 7.9k
0
votes
1
reply
2.0k
views
Install package phyloseq
installation phyloseq
updated 6.9 years ago by 25k • written 6.9 years ago by • 0
1
vote
1
reply
3.6k
views
Cannot use Bioconductor with new conda R installation?
bioconductor biocinstaller installation conda
6.9 years ago jol.espinoz ▴ 40
6
votes
2
replies
1.9k
views
Is there a way to tell biocLite() to install a Bioconductor package only if it is not installed already?
bioclite package installation installation install
updated 7.0 years ago by ★ 6.6k • written 7.0 years ago by ▴ 10
0
votes
3
replies
3.1k
views
ERROR: compilation failed for package RSQLite
ubuntu installation
updated 7.1 years ago by 25k • written 7.1 years ago by ▴ 70
0
votes
1
reply
2.9k
views
installation of package 'goseq' had non-zero exit status
goseq installation
updated 7.1 years ago by 25k • written 7.1 years ago by • 0
0
votes
1
reply
1.4k
views
Issues installing "CardinalWorkflows"
installation CardinalWorkflows Imaging mass spectrometry Cardinal
updated 7.2 years ago by ★ 6.8k • written 7.2 years ago by • 0
1
vote
0
replies
1.3k
views
Reinstalling failing - Check packages for root user, too
biocinstaller root installation installation problem
7.3 years ago charles.tilford ▴ 10
0
votes
0
replies
1.6k
views
Problem with ade4 when upgrading to Rstudio 1.1 and OpenR 3.4
phyloseq installation ade4 macos
7.3 years ago sprague • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10
I see. Thank you ATpoint!
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by Prakash Sah • 0
Thanks James!
Comment: Why select top highly expressed genes based on normalized counts, but then plot by ATpoint ★ 4.6k
I think I explained what the differences between approach 1 and 2 is in my answer. I assume that the tutorial uses vst because it is varian…
Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10
Thank you ATpoint for your responses. I am a bit confused because the difference between the two approaches is the selection of the genes…
Votes
Comment: can't install tscR
Answer: Csaw normalization strategies - general inquiry
A: DESeq2 interaction term
Comment: Recount3 data correspond to TCGA data
Answer: DESeq2- merging technical vs biological replicates
Awards • All
Popular Question to Maria Doyle ▴ 90
Popular Question to Robert Ivanek ▴ 750
Popular Question to shepherl 4.1k
Popular Question to Gordon Smyth 52k
Popular Question to Koen Van den Berge ▴ 180
Locations • All
United States, 16 minutes ago
United States, 17 minutes ago
United States, 27 minutes ago
United States, 38 minutes ago
Switzerland, 47 minutes ago
Traffic: 900 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6
pFad - Phonifier reborn

Pfad - The Proxy pFad of © 2024 Garber Painting. All rights reserved.

Note: This service is not intended for secure transactions such as banking, social media, email, or purchasing. Use at your own risk. We assume no liability whatsoever for broken pages.


Alternative Proxies:

Alternative Proxy

pFad Proxy

pFad v3 Proxy

pFad v4 Proxy