An Introduction To T-Tests

An introduction to t-tests
Published on January 31, 2020 by Rebecca Bevans. Revised on December 14, 2020.
A t-test is a statistical test that is used to compare the means of two groups. It is often used
in hypothesis testing to determine whether a process or treatment actually has an effect on the
population of interest, or whether two groups are different from one another.
You want to know whether the mean petal length of iris flowers differs according to their
species. You find two different species of irises growing in a garden and measure 25 petals of
each species. You can test the difference between these two groups using a t-test.
 The null hypothesis (H0) is that the true difference between these group means is zero.
 The alternate hypothesis (Ha) is that the true difference is different from zero.
Table of contents
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2.
3.
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6.
When to use a t-test

A t-test can only be used when comparing the means of two groups (a.k.a. pairwise comparison).
If you want to compare more than two groups, or if you want to do multiple pairwise
comparisons, use an ANOVA test or a post-hoc test.
The t-test is a parametric test of difference, meaning that it makes the same assumptions about
your data as other parametric tests. The t-test assumes your data:
1. are independent
2. are (approximately) normally distributed.
3. have a similar amount of variance within each group being compared (a.k.a. homogeneity
of variance)
If your data do not fit these assumptions, you can try a nonparametric alternative to the t-test,
such as the Wilcoxon Signed-Rank test for data with unequal variances.
What type of t-test should I use?

When choosing a t-test, you will need to consider two things: whether the groups being
compared come from a single population or two different populations, and whether you want to
test the difference in a specific direction.
One-sample, two-sample, or paired t-test?
 If the groups come from a single population (e.g. measuring before and after an
experimental treatment), perform a paired t-test.
 If the groups come from two different populations (e.g. two different species, or people
from two separate cities), perform a two-sample t-test (a.k.a. independent t-test).
 If there is one group being compared against a standard value (e.g. comparing the acidity
of a liquid to a neutral pH of 7), perform a one-sample t-test.
One-tailed or two-tailed t-test?
 If you only care whether the two populations are different from one another, perform
a two-tailed t-test.
 If you want to know whether one population mean is greater than or less than the other,
perform a one-tailed t-test.
In your test of whether petal length differs by species:
 Your observations come from two separate populations (separate species), so you
perform a two-sample t-test.
 You don’t care about the direction of the difference, only whether there is a difference, so
you choose to use a two-tailed t-test.
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Performing a t-test
The t-test estimates the true difference between two group means using the ratio of the difference
in group means over the pooled standard error of both groups. You can calculate it manually
using a formula, or use statistical analysis software.
T-test formula
The formula for the two-sample t-test (a.k.a. the Student’s t-test) is shown below.
In this formula, t is the t-value, x1 and x2 are the means of the two groups being compared, s2 is
the pooled standard error of the two groups, and n1 and n2 are the number of observations in each
of the groups.
A larger t-value shows that the difference between group means is greater than the pooled
standard error, indicating a more significant difference between the groups.
You can compare your calculated t-value against the values in a critical value chart to determine
whether your t-value is greater than what would be expected by chance. If so, you can reject the
null hypothesis and conclude that the two groups are in fact different.
T-test function in statistical software
Most statistical software (R, SPSS, etc.) includes a t-test function. This built-in function will take
your raw data and calculate the t-value. It will then compare it to the critical value, and calculate
a p-value. This way you can quickly see whether your groups are statistically different.
In your comparison of flower petal lengths, you decide to perform your t-test using R. The code
looks like this:
t.test(Petal.Length ~ Species, data = flower.data)

Download the data set to practice by yourself.
Sample data set
Interpreting test results

If you perform the t-test for your flower hypothesis in R, you will receive the following output:
The output provides:
1. An explanation of what is being compared, called data in the output table.

2. The t-value: -33.719. Note that it’s negative; this is fine! In most cases, we only care
about the absolute value of the difference, or the distance from 0. It doesn’t matter which
direction.
3. The degrees of freedom: 30.196. Degrees of freedom is related to your sample size, and
shows how many ‘free’ data points are available in your test for making comparisons.
The greater the degrees of freedom, the better your statistical test will work.
4. The p-value: 2.2e-16 (i.e. 2.2 with 15 zeros in front). This describes the probability that
you would see a t-value as large as this one by chance.
5. A statement of the alternate hypothesis (Ha). In this test, the Ha is that the difference is
not 0.
6. The 95% confidence interval. This is the range of numbers within which the true
difference in means will be 95% of the time. This can be changed from 95% if you want
a larger or smaller interval, but 95% is very commonly used.
7. The mean petal length for each group.
From the output table, we can see that the difference in means for our sample data is -4.084
(1.456 – 5.540), and the confidence interval shows that the true difference in means is between
-3.836 and -4.331. So, 95% of the time, the true difference in means will be different from 0.
Our p-value of 2.2e-16 is much smaller than 0.05, so we can reject the null hypothesis of no
difference and say with a high degree of confidence that the true difference in means is not
equal to zero.
Presenting the results of a t-test

When reporting your t-test results, the most important values to include are the t-value, the p-
value, and the degrees of freedom for the test. These will communicate to your audience
whether the difference between the two groups is statistically significant (a.k.a. that it is unlikely
to have happened by chance).
You can also include the summary statistics for the groups being compared, namely the mean
and standard deviation. In R, the code for calculating the mean and the standard deviation from
the data looks like this:
flower.data %>%
group_by(Species) %>%
summarize(mean_length = mean(Petal.Length),
sd_length = sd(Petal.Length))
In our example, you would report the results like this:
The difference in petal length between iris species 1 (Mean = 1.46; SD = 0.206) and iris species
2 (Mean = 5.54; SD = 0.569) was significant (t (30) = -33.7190; p < 2.2e-16).

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An introduction to t-tests

Published on January 31, 2020 by Rebecca Bevans. Revised on December 14, 2020.

When to use a t-test

What type of t-test should I use?

One-sample, two-sample, or paired t-test?

One-tailed or two-tailed t-test?

In your test of whether petal length differs by species:

What is your plagiarism score?

 Best plagiarism checker of 2020

Scribbr Plagiarism Checker

t.test(Petal.Length ~ Species, data = flower.data)

Sample data set

Interpreting test results

The output provides:

1. An explanation of what is being compared, called data in the output table.

Presenting the results of a t-test

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