SFSDF SDF
SFSDF SDF
SFSDF SDF
REVISION NOTES
Module 5 Physical and transitional chemistry& module 6 Organic chemistry
and analysis
This module extends the study of energy, reaction rates and equilibria, and the periodic table. The
main areas of physical chemistry studied include:
• electrochemical cells. T
• redox chemistry
• transition elements.
v rate constant
k is the rate constant of the reaction.
vi half-life
The half-life of a reaction, t1/2, is the amount of time needed for a reactant concentration
to decrease by half compared to its initial concentration. Its application is used in chemistry
and medicine to predict the concentration of a substance over time
The orders of reaction with respect to each reactant in the reaction can be determined by
carrying out the reaction with various different initial concentrations and measuring the
change in initial rate of reaction. The orders of reaction can be determined arithmetically or
graphically.
If the order of reaction with respect to one reactant is being determined, the concentration of
one reactant only should change; the others should remain constant so that the change in rate
can be attributed to the change in concentration of that reactant alone.
If the overall order is being determined, the concentration of all reactants should change by
the same factor.
If the reaction is first order, then if the concentration doubles the rate will also double. If the
concentration triples the rate will also triple, etc.
If the reaction is second order, then if the concentration doubles the rate will quadruple. If the
concentration triples the rate will increase ninefold, etc.
If the reaction is zero order, then the change in concentration will have no effect on the rate
of reaction.
Example 1
Initial concentration of RX/ Initial concentration of OH/ Initial rate/ moldm-3 s-1
moldm-3 moldm-3
0.01 0.04 8 x 10-3
0.01 0.02 4 x 10-3
0.005 0.04 4 x 10-3
From expt 2 to expt 1, the concentration of hydroxide ions doubles and the concentration of
RX is unchanged. The rate also doubles, so the order of reaction with respect to OH- is 1.
From expt 3 to expt 1, the concentration of RX doubles and the concentration of hydroxide
ions is unchanged. The rate also doubles, so the order of reaction with respect to RX is also 1.
Having deduced the rate equation, the rate constant can be calculated using the data in one of
the experiments.
From expt 1 to expt 2, the concentration of PCl3 doubles and the concentration of Cl2 is
unchanged. The rate also doubles, so the order of reaction with respect to PCl3 is 1.
From experiment 2 to experiment 3, the concentration of both reactants doubles. The rate
increases eightfold, so the overall order of reaction is three.
If the concentrations in the different experiments are not simple whole number ratios of each
other, it is not easy to compare the concentrations and rates. The order of reaction with
respect to each reactant can be deduced by plotting a graph of concentration vs initial rate (an
initial rate-concentration graph)
a) first-order reactions
If Rate = k[A], then a plot of initial rate against initial concentration will be a staight line
through the origin of gradient k:
b) second-order reactions
If rate = k[A] 2, then a plot of initial rate against initial concentration will be a curve through
the origin.
If rate = k, then a plot of initial rate against initial concentration will be a horizontal line:
An even better method is to plot log (rate of reaction) against log (concentration). This should
always give a straight line, the gradient of which is the order of reaction.
Half lives
The half-life is the time needed for any reactant concentration to fall to half of its initial
value.
3. Measuring initial rates of reaction
In some reactions, it is not easy to measure the rate of reaction directly, and easier to mention
the time taken for a particular stage in the reaction to be reached.
Since rate is the change in concentration per unit time, it follows that the rate is inversely
proportional to time taken. A graph of 1/t against initial concentration will give curves
like those shown above.
It is not always possible to carry out several different experiments. It is possible to obtain
much useful information about the kinetics of a reaction by monitoring how the concentration
of a reaction changes over time in a single reaction, and then plotting a graph of
concentration against time (a concentration-time graph).
0.5
0.4
0.3
0.2
0.1
0
0 1000 2000 3000 4000 5000
time/s
The rate of reaction is the change in concentration per unit time and can therefore be
calculated from the gradient of the line at a particular time.
As the graph is a curve (its gradient is steadily decreasing with time), the gradient of the line
at a particular point must be calculated by drawing a tangent to that line at a particular point
and calculating the gradient of that tangent.
www.avogadro.co.uk
The initial rate of reaction is the gradient of the tangent to the curve at t = 0.
The rate of reaction at a particular time is the gradient of the tangent to the curve at that
particular time.
b) Deducing the order of reaction and the rate constant from the graph
By measuring the gradients of the tangents at different points on the curve, it is possible to
deduce the order of reaction by the arithmetic method:
Then measure the rate of reaction after the concentration of SO2Cl2 has fallen to half of its
initial value:
After 2200 s, the concentration of SO2Cl2 is 0.25 moldm-3.
The gradient of the tangent to the curve at this point is 8.0 x 10-5 moldm-3s-1
It is clear that when the concentration of SO2Cl2 halves, the rate of reaction also halves. This
shows that the order of reaction with respect to of SO2Cl2 is 1 and that the rate equation is
therefore rate = k[SO2Cl2].
If the rate of reaction has fallen by a factor of 4 when the concentration had halved, it would
show that the reaction was second order.
If the rate of reaction had not fallen at all when the concentration had halved, it would show
that the reaction was zero order.
The rate constant can be determined by rearranging the rate equation: k = rate/[SO2Cl2]
The orders of reaction for a chemical equation are not always the same as the reaction
coefficients:
Many reactions consist of a series of different steps, some of which are slow and some of
which are very fast.
It is the slowest step in a chemical reaction which determines how fast a reaction is. For this
reason the slowest step in a chemical reaction is called the rate-determining step. Changing
the rate of this step will affect the overall rate of reaction; changing the rate of fast steps
won’t.
Eg consider the reaction NO2 + H2 NO + H2O
This reaction happens in two steps:
Step 1: NO2 + NO2 NO3 + NO this step is slow
Step 2: NO3 + H2 NO2 + H2O this step is fast
Step 1 is the slowest step and is therefore the rate-determining step. This involves two
molecules of NO2, and so doubling the concentration of NO2 will make collisions in this step
four times more likely. So the reaction is second order with respect to NO2. H2 is not
involved in this step; it is only involved in the second, fast step. Changing the concentration
of H2 therefore has no effect on the rate of reaction, and the reaction is zero order with
respect to H2.
The rate equation of a chemical reaction is determined by the number of each species
involved in the rate-determining step of that reaction.
The rate equation shows the relationship between the concentration of reactants and the rate
of reaction.
If the concentration of one of the reactants increases, the rate of reaction will also increase,
the rate constant, k will not change.
If the pressure increases, the concentration of all the reactants will increase and so the rate of
reaction will also increases. Again the rate constant will not change.
If the temperature increases, however, or a catalyst is added, the rate of reaction increases
without a change in concentration, and so it must be the rate constant, k, that is changing.
The rate constant k thus varies with temperature, and is also affected by the addition of a
catalyst.
Use this data to establish which species are involved in the rate determining step.
Answer:
In experiments 1and 2, doubling concentration of propanone doubles the rate initially. (First
order)
In experiments 1 and 4 doubling hydrogen ions doubles the rate. (First order)
In experiments 1 and 5, doubling the concentration of iodine has no effect on rate. (Zero
order)
The rate determining step therefor involves both hydrogen and propanone but not
iodine.
Rate equations as evidence for SN1 and SN2 mechanisms for tertiary and primary
halogenoalkane hydrolysis
Only the experimental rate data can show which mechanism actually takes place.
The single step illustrated for the substitution of 1-iodopropane, a primary halogenoalkane,
involves two different species – both the hydroxide ion and the primary halogenoalkane. •
The reaction will be second order – it depends on the concentration of both the hydroxide
ion and the primary halogenoalkane. So, rate
The C-halogen bond breaks first (slow step) followed by attack by the hydroxide ion (fast
step).
• The slow step involves only one species and does not depend on the concentration of
hydroxide ions. Hence the reaction is first order overall: rate = k[RI]
Activation energy is the smallest amount of energy needed by reactants for products to form.
The relationship between the rate constant of a reaction and the temperature can be quantified
using the Arrhenius equation:
k = Ae(-Ea/(RT))
In this equation, Ea is the activation energy for the reaction (in Jmol-1), T is the temperature
(in K), R is the molar gas constant (in Jmol-1K-1) and A is the Arrhenius constant (which
varies from reaction to reaction)
A graph of logk against 1/T should therefore give a straight line of gradient Ea/R. This
gradient can be used to determine the activation energy of the reaction.
For example, the initial rate of reaction between HCl and Na2S2O3 can be monitored at
different temperatures by measuring how long it takes for the Sulphur produced during this
reaction to prevent an X on a piece of paper under the reaction flask from being visible.
A value proportional to k can be found by calculating (1/time taken)
0.00340
0.00335
0.00330
llog(1/time taken)
0.00325
0.00320
0.00315
0.00310
0.00305
0.00300
-2.50 -2.00 -1.50 -1.00 -0.50 0.00
1/T(K-1)
The gradient of this line can then be taken and it is approximately -2900K
Points to remember:
Equilibrium constant values are only changed by temperature changes
Calculating Kp
Calculating Kc
Value of Kc or Kp :
pH
pH is a measure of the dissociation of an acid or base, and also of the concentration of that acid /
base (and is related to the concentration of H3O+ ions).
Examples:
Example 1:
Calculate the pH of a 0.01 moles dm-3solution of a strong acid HCl.
As the acid only contains one hydrogen atom it will only produce one hydrogen ion per
molecule when dissolved in water.
Therefore the H+ concentration is = 0.01 moles dm-3
log 0.01 = -2
pH = 2
Example 2:
Calculate the pH of a 0.01 moles dm-3 solution of a strong base NaOH
As the base only contains one OH group it will only produce one hydroxide ion per molecule
when dissolved in water.
Therefore the OH- concentration is = 0.01 moles dm-3
As the ionic product of water at 25ºC [H+] x [OH-] = 1 x 10-14
Then [H+] = 1 x 10-12
log 1 x 10-12 = -12
pH = 12
dm3
pH = -log10[H+]
=> [H+] equals concentration of the acid e.g. HCl, unless it is a diprotic acid, like H2SO4,
which has double the H+ concentration
The stronger the ability of an acid to donate protons, the stronger the acid
An acid can become a base if paired with a stronger acid, forming new conjugated acid-base
pairs:
pH of a weak acid
A weak acid is one that is only partially ionised e.g Ethanoic acid
Example:
or
Example
Ka for some simple acids
Acid Ka (mol dm-3)
Hydrofluoric acid 5.6 x 10-4
Methanoic acid 1.6 x 10-4
Ethanoic acid 1.7 x 10-5
Hydrogen sulphide 8.9 x 10-8
The smaller the Ka value the weaker the acid
pKa
This is the acid dissociation constant
Formula:
the pKa value is directly proportional to the standard Gibbs free energy change for the
reaction. The value of the pKa changes with temperature and can be understood
qualitatively based on Le Châtelier's principle: when the reaction is endothermic, Ka
increases and pKa decreases with increasing temperature; the opposite is true for
exothermic reactions.
Example:
Titration curves
Key definitions of terms
End point: When indicator changes colour
Equivalence point: When colour change occurs after solutions are mixed in exact equation
proportions
Types of curves
Buffers
A buffer solution can resist changes in pH when small amounts of acid or base are added. An
acidic buffer maintains a pH below 7 and consists of a weak acid and its salt. A basic buffer
maintains pH above 7 and consists of a weak acid and its salt.
For example, an acidic buffer could contain ethanoic acid and sodium ethanoate. This will
produce the following reactions:
The equilibrium for the first reaction is far to the left and the equilibrium for the second
reaction is shifted to the right. If an acid is added the H+ reacts with the excess CH3COO-
and this become ethanoic acid, which doesn't change the equilibrium. If a base is added the
OH- reacts with hydrogen from reaction 1 to become water. However, this disrupts the
equilibrium and more H+ is produced to compensate. Some ethanoic acid molecules are
changed to ethanoate ions but as there is a large concentration of the salt ion in the buffer
the ratio [CH3CO2H]/ [CH3CO2-] stays almostconstant, so the pH stays fairly constant.
Calculating pH of buffer solutions
If a small amount of acid is added to a buffer then the moles of the buffer salt would reduce
by the number of moles of acid added and the moles of buffer acid would increase by the
same amount so a new calculation of pH can be done with the new values.
Example:
0.005 mol of NaOH is added to 500cm3 of a buffer where the concentration of ethanoic
acid is 0.200 mol dm-3 and the concentration of sodium ethanoate is 0.250 mol dm-3.
(Ka = 1.7 x 10-5)
Calculate the pH of the buffer solution after the NaOH has been added.
Work out the moles of acid and salt in the initial buffer solution
Moles ethanoic acid= conc x vol = 0.200 x 0.500 = 0.100mol
Moles sodium ethanoate = conc x vol = 0.25 x 0.500 = 0.125mol
Work out the moles of acid and salt in buffer after the addition of 0.005mol NaOH
Moles ethanoic acid = 0.100 - 0.005 = 0.095 mol
Moles sodium ethanoate = 0.125 +0.005 = 0.130 mol
Making buffers
Buffers can be made in several ways:
Adding a salt solution
What would be the pH of a buffer made from 45cm3 of 0.1M ethanoic acid
and 50cm3 of 0.15 M sodium ethanoate (Ka = 1.7 x 10-5) ?
Work out the moles of both solutions
Moles ethanoic = conc x vol = 0.1 x 0.045 = 0.0045mol
Moles sodium ethanoate = conc x vol = 0.15 x 0.050 = 0.0075
To prepare a buffer solution of a given pH, it is necessary to have the acid and base
concentrations in a suitable ratio.
Eg to prepare an NH3/NH4Cl buffer of pH = 10
[H3O+] = [acid] so [NH4+] = 1 x 10-10 = 1/5.6
Ka [base] [NH3] 5.6 x 10-10
[H3O+] = Ka[acid]
[base]
so log10[H3O+] = log10Ka + log10([acid]/[base])
so -log10[H3O+] = -log10Ka + log10([base]/[acid])
so pH = pKa + log10([base]/[acid])
pH = pKa + log10([base]/[acid])
pH = pKa + log10([base]/[acid])
Natural buffers
There are many biological systems which rely on a fairly constant pH, and which rely
on the use of buffer solutions to maintain this pH.
a) Blood
The pH of blood must be maintained at around 7.4. Hydrogen carbonate ions are
used for this purpose:
HCO3-(aq) + H3O+ (aq) CO2 (g) + 2H2O(l)
HCO3-(aq) + OH-(aq) CO2 (aq) + H2O (l)
b) Tears
The pH of tears must also be maintained at around 7.4, in this case by the use of
amino acids:
Lattice energy Is the energy change when one mole of an ionic solid is formed from its
gaseous ions.
Enthalpy change of atomisation, ΔatH
The enthalpy of atomisation of an element is the enthalpy change when 1 mole of gaseous
atoms is formed from the element in its standard state
Na (s) Na(g) [∆atH = +148 kJ mol-1]
½ O2(g) O (g) [∆atH = +249 kJ mol-1]
Electron affinity
Electron affinity of an atom or molecule is defined as the amount of energy released or
spent when an electron is added to a neutral atom or molecule in the gaseous state to form
a negative ion.
First electron affinities have negative values. For example, the first electron affinity of
chlorine is -349 kJ mol-1. By convention, the negative sign shows a release of energy.
Group 7 electron affinities
F -328 kJ mol-1
Cl -349 kJ mol-1
Br -324 kJ mol-1
I -295 kJ mol-1
The first electron affinity is exothermic for atoms that normally form negative ions because
the ion is more stable than the atom and there is an attraction between the nucleus and the
electron.
As you go down the group, first electron affinities become less (less energy is evolved when
the negative ions are formed). Fluorine however breaks that pattern.
The electron affinity is a measure of the attraction between the incoming electron and the
nucleus - the stronger the attraction, the more energy is released. The factors which affect
this attraction are exactly the same as those relating to ionisation energies - nuclear charge,
distance and screening.
Second electron affinity- this is the enthalpy change when one mole of gaseous 1- ions
gains one electron per ion to produce gaseous 2- ions.
O –(g) + e- O2- (g) [∆Hea = +798 kJ mol-1]
The second electron affinity for oxygen is endothermic because it take energy to overcome
the repulsive force between the negative ion and the electron
The elements in their standard states are turned into gaseous atoms.
The gaseous atoms become gaseous ions.
The gaseous ions come together to form solid sodium chloride.
By applying Hess’s Law, the lattice enthalpy can then be calculated.
Applying Hess’s law to this cycle, which states that the enthalpy change for a reaction is the
same regardless of how many steps occur in that reaction, it is possible to calculate the
lattice enthalpy.
The arrows pointing upwards represent endothermic changes, those pointing downwards
show exothermic changes.
From the Born-Haber Cycle, the enthalpy change associated with the route depicted by the
blue arrow is equal to the enthalpy change of the route shown by the red arrow.
The Born-Haber cycle for sodium chloride is shown below:
Polarisation
Ions
Ionic bonds can be polarised by the cations strongly attracting the outer shell
electrons of the anion. This polarisation will depend on:
Its charges density – dependent on ion size and charge
Radius of ion- smaller ionic radii = greater charge so greater
charge density
For anions, larger radii = easier polarisation
Enthalpy change of hydration ΔHhyd
Even though energy is needed to break up the lattice, many ionic substances do dissolve.
Therefore, something else must happen to supply that energy.
Water molecules possess a dipole and are attracted to the ions on the surface of the lattice
when an ionic compound is added to water.
The water molecules pull the ions from the surface of the compound; the ions in the
solution become hydrated; they have water molecules bound to them:
The smaller the ion and the higher its charge, the more water molecules it attracts.
The strength of the attractions between the ions and the water molecules is measured by
the enthalpy of hydration (ΔHhyd).
The enthalpy change of hydration is defined as the enthalpy change for the production of
a solution of ions from one mole of gaseous ions.
For example:
The enthalpy of solution, enthalpy of dissolution, or heat of solution is the enthalpy change
associated with the dissolution of a substance in a solvent at constant pressure resulting in
infinite dilution. The enthalpy of solution is most often expressed in kJ/mol at constant
temperature. Enthalpies of solution may be either positive or negative - in other words,
some ionic substances dissolved endothermically (for example, NaCl); others dissolve
exothermically (for example NaOH)
Hess’ law is used to calculate enthalpy changes of solution
The hydration of ions favours dissolving and helps to supply the energy needed to separate
the ions from a lattice.
The process of dissolving can be broken down into two steps:
The solid ionic compound is split up into a gas of ions (requires the energy equal to
the lattice energy to be supplied).
The ions dissolve in solution and become hydrated; the energy equal to the
hydration energies of the two ions is given out.
Examples of enthalpy changes of solutions
Even if the value of Hsolution is positive, the substance may still dissolve; this is related
to the change in entropy of the system that occurs.
HLE and HHyd values are often very large and are dependent on the size and charge of
the ions involved.
As a result, the values of Hsolution are often small by comparison, and can be either
positive or negative.
Since some endothermic reactions can occur at room temperature, enthalpy changes alone
do not control whether reactions occur. Consideration of entropy is vital.
Entropy is a measure of the disorder of a system and the natural direction of change is
increasing total entropy (positive entropy change)
The entropy of a system increases when a solute dissolves, as it becomes more disordered
as the ions spread out through the solution.
Substances with more ways of arranging their atoms and energy (more disordered) have a
higher entropy.
An increase in entropy favours dissolving- even if a small amount of energy is needed.
So substances with a small positive enthalpy change of solution are still able to dissolve,
provided there is a sufficient increase in entropy.
This can be used to explain why salt (NaCl) dissolves, but calcium carbonate (chalk) does
not.
When salt dissolves there is a large increase in entropy, which counteracts the small positive
enthalpy change of solution value that it has.
Calcium carbonate, on the other hand, has a small negative enthalpy change of solution;
however a decrease in entropy results from it dissolving and so it is insoluble in water.
The decrease in entropy occurs because the solvent, water, is becoming more ordered as
the water molecules cluster around the doubly charged ions.
When considering entropy it is useful to split the system (the chemicals) from the
surroundings.
A system will consist of reactants and then products. It does not change temperature or
pressure, and mass cannot be transferred to the surroundings. Energy can be transferred to
the surroundings.
Entropy of surroundings
Exothermic versus endothermic reactions
For changes of state, such as melting and boiling, ΔG = 0 and the two states are in
equilibrium
If the reaction involves an increase in entropy (∆S is +ve) then increasing Temperature will
make it more likely that ∆G is negative and more likely that the reaction occurs
If the reaction involves an decrease in entropy (∆S is -ve) then increasing Temperature will
make it more less likely that ∆G is negative and less likely for the reaction to occur .
If the reaction has a ∆S close to zero then temperature will not have a large effect on the
feasibility of the reaction as - T∆S will be small and ∆G won’t change much
Oxidation can be defined as loss of electrons and reduction as gain of electrons. For
example:
The oxidation gives a compound its name, for example Iron (IV) oxide means the oxidation
state of iron is 4 so therefore there must be two oxygen atoms bonded to it. S-block metals
loose their electrons in a reaction, so are good reductants (they are oxidized easily). There
are also p-block elements which can have different oxidation states; and those in group VII,
gain electrons in reactions so are good oxidants (they gain electrons easily).
Electrode potentials- Standard hydrogen electrode
This is the 'potential' of a redox system to lose or gain electrons when compared to the
standard hydrogen electrode - assigned a value of 0 volts.
In any reduction-oxidation half equation the electrons are gained by the species on the left
hand side:
Cu2+ + 2e Cu
The electrode potential measures the tendency of electrons to flow away from or towards a
redox equilibrium. They are always measured with respect to the standard hydrogen
electrode (which is assigned a value of zero volts).
Components of a standard hydrogen electrode.
To make the electrode a standard reference electrode
some conditions apply:
1. Hydrogen gas at pressure of 100 kPa
2. Solution containing the hydrogen ion at 1.00 mol dm-3
(solution is usually 1M HCl)
3. Temperature at 298K
Standard conditions are needed because the position of the redox equilibrium will change
with conditions.
Equilibrium redox systems with the reduced side (usually a metal) more reactive than
hydrogen have a negative electrode potential, i.e. they can lose electrons more easily than
hydrogen.
Equilibrium redox systems with the reduced side less reactive than hydrogen have a positive
electrode potential, i.e. they can lose electrons less easily than hydrogen.
Zn Zn2+ + 2e
has more of a tendency to move to the right hand side than the equilibrium...
H2 2H+ + 2e
Hence if the two equilibria are brought into electrical contact using an external wire
and a salt bridge, the electrons will be pushed from the zinc equilibrium to the
hydrogen equilbrium with a force of - 0.76V (the negative sign simply indicates the
direction of flow - from zinc to hydrogen ions)
The two equations then may be summed together to give the reaction occuring in the
whole cell.
Zn Zn2+ + 2e
2H+ + 2e H2
overall cell reaction
Zn + 2H+ Zn2+ + H2
In the above apparatus setup the copper | copper sulphate (aq) half cell is connected to the
SHE via an external circuit containing a high resistance voltmeter (high resistance to prevent
passage of current)
There is a salt bridge to complete the circuit - this allows the ions to flow from one side to
another to equalise the movement of charge.
Once the apparatus is setup the reading on the high resistance voltmeter records the
electrode potential of the Cu|Cu2+(aq) system
In this particular case the voltmeter will read +0.34 V indicating that copper is less reactive
than hydrogen and that there is a force pushing electrons around the external circuit from
the hydrogen half cell to the copper half cell.
Electrochemical cells
•A cell has two half–cells.
•Simple half cells will consist of a metal (acts an electrode) and a solution of a compound containing
that metal (eg Cu and CuSO4 ).
•These two half cells will produce a small voltage if connected into a circuit. (i.e. become a Battery
or cell).
The more negative half cell will always oxidise (go backwards)
Mg2+ (aq) + 2e- Mg(s) E= -2.37V
Cu2+ (aq) + 2e- Cu (s) E = +0.34V
The more positive half cell will always reduce (go forwards)
The more negative the E° value, the further the position of equilibrium lies to the left.
Remember that this is always relative to the hydrogen equilibrium - and not in absolute
terms.
The negative sign of the zinc E° value shows that it releases electrons more readily than
hydrogen does. The positive sign of the copper E° value shows that it releases electrons
less readily than hydrogen.
Whenever you link two of these equilibria together (either via a bit of wire, or by allowing
one of the substances to give electrons directly to another one in a test tube) electrons flow
from one equilibrium to the other. That upsets the equilibria, and Le Chatelier's Principle
applies. The positions of equilibrium move - and keep on moving if the electrons continue to
be transferred.
The two equilibria essentially turn into two one-way reactions:
The equilibrium with the more negative (or less positive) E° value will move to the
left.
The equilibrium with the more positive (or less negative) E° value will move to the
right.
At times, E° values suggest that a reaction ought to happen, but it doesn't. Occasionally, a
reaction happens although the E° values seem to be the wrong way around
All the E° values show is that a reaction is possible. They don't tell you that it will actually
happen. There may be very large activation barriers to the reaction which prevent it from
taking place. Always treat what E° values tell you with some caution. All they tell you is
whether a reaction is feasible - they tell you nothing about how fast the reaction will
happen.
SPONTANEOUS REACTIONS
If two half-cells are connected electrically and a current allowed to flow, the more positive
electrode will undergo reduction and the more negative electrode will undergo oxidation.
The oxidising agent at the more positive electrode is reduced, and thus oxidises the reducing
agent at the more negative electrode.
Eg If the zinc electrode and the copper electrode are connected, the following reaction takes
place:
Zn(s) + Cu2+(aq) Zn2+(aq) + Cu(s)
It can be assumed that if a reaction occurs electrochemically, it will also occur chemically.
Thus if zinc metal is added to a solution of copper (II) sulphate, the above reaction will
occur.
If copper metal is added to a solution of zinc (II) sulphate, however, no reaction will occur. If
any reaction did occur, it would have to be
Cu(s) + Zn2+(aq) Cu2+(aq) + Zn(s)
This reaction is not the one which takes place if the two half-cells are connected, and
therefore cannot be expected to take place in other circumstances.
Since the more positive electrodes are at the bottom of the electrochemical series, the
oxidising agents in these systems will oxidise any reducing agent which lies above it in the
electrochemical series.
Eg H+(aq) will oxidise Pb(s) to Pb2+(aq), and any other metal above it, but will not oxidise
Cu(s) to Cu2+(aq) or any metal below it.
Pb(s) + 2H+(aq) Pb2+(aq) + H2(g)
Acids such as nitric acid, however, which contains the more powerful oxidising agent NO 3-
(aq), will oxidise any reducing agent with a standard electrode potential more negative than
+0.81V, eg Cu(s)
Cu(s) + 4H+(aq) + 2NO3-(aq) Cu2+(aq) + 2NO2(g) + 2H2O(l)
Reducing agents will reduce any oxidising agent which lies below it in the electrochemical
series.
Eg Fe2+(aq) will reduce VO2+(aq) to VO2+(aq), but not VO2+(aq) to V3+(aq) or V3+(aq) to V2+(aq)
VO2+(aq) + 2H+(aq) + Fe2+(aq) VO2+(aq) + H2O(l) + Fe3+(aq)
2. Cell potential
A more systematic method of predicting whether or not a reaction will occur is to construct
two half-equations, one reduction and one oxidation, for the reaction trying to take place.
Since reduction occurs at the more positive electrode, consider the reduction process to be
the right-hand electrode and the oxidation process to be the left-hand electrode.
The cell potential for the reaction is given by ERHS - ELHS, or EReduction - EOxidation.
If the cell potential is positive, the reaction will occur.
If the cell potential is negative, the reaction will not occur.
This method can be used to predict whether or not any given redox reaction will take place.
a) Displacement reactions
Eg. Predict whether or not zinc metal will displace iron from a solution of FeSO 4(aq).
The reaction under consideration is Zn(s) + Fe2+(aq) == Zn2+(aq) + Fe(s)
Reduction: Fe2+(aq) + 2e == Fe(s) (Eo = -0.44V)
Oxidation: Zn(s) == Zn2+(aq) + 2e (Eo = -0.76V)
ECELL = -0.44 -(-0.76) = +0.32V
So the reaction will occur.
Eg Predict whether or not zinc metal will desplace manganese from a solution of
MnSO4(aq)
The reaction under consideration is Zn(s) + Mn2+(aq) Zn2+(aq) + Mn(s)
Reduction: Mn2+(aq) + 2e == Mn(s) (Eo = -1.19V)
Oxidation: Zn(s) == Zn2+(aq) + 2e (Eo = -0.76V)
ECELL = -1.19 -(0.76) = -0.43V
So the reaction will not occur.
Eg Predict whether or not bromine will displace iodine from a solution of KI(aq)
The reaction under consideration is Br2(aq) + 2I-(aq) == 2Br-(aq) + I2(aq)
Reduction: Br2(aq) + 2e == 2Br-(aq) (Eo = +1.09V)
Oxidation: 2I-(aq) == I2(aq) + 2e (Eo = +0.54V)
ECELL = 1.09 - 0.54 = +0.55V
So the reaction will occur.
Eg Predict whether or not bromine will displace chlorine from a solution of NaCl(aq)
The reaction under consideration is Br2(aq) + 2Cl-(aq) == 2Br-(aq) + Cl2(aq)
Reduction: Br2(aq) + 2e == 2Br-(aq) (Eo = +1.09V)
Oxidation: 2Cl-(aq) == Cl2(aq) + 2e (Eo = +1.36V)
ECELL = 1.09 - 1.36 = -0.27V
So the reaction will not occur.
b) Disproportionation
Standard electrode potentials can be used to predict whether or not a species will
disproportionate.
3. Non-standard conditions
Though cell potential is often a correct prediction of whether or not a given reaction will
take place, it does strictly apply only to standard conditions. If the solutions used are either
very concentrated or very dilute, then the electrode potentials will not be the standard
electrode potentials and the sign of the cell potential may be different from that predicted
under standard conditions. Thus many reactions which are not expected to occur do in fact
take place if the solutions are hot or concentrated, and many reactions which are expected
to occur do not take place if the solutions are too dilute.
4. Kinetic stability
Cell potentials can be used effectively to predict whether or not a given reaction will take
place, but they give no indication as to how fast a reaction will proceed. In many cases ECELL
is positive but no apparent reaction occurs. This is because the reactants are kinetically
stable; the reaction has a high activation energy so is very slow at room temperature. There
are many examples of this in inorganic chemistry:
Thus if a reaction is expected to take place but is found not to, there are two possible
reasons:
- the solutions are too dilute (ie conditions are non-standard)
- the reaction is very slow (ie reactants are kinetically stable)
If a reaction is not expected to take place but does take place, then it is because the
conditions are non-standard (ie the solutions are concentrated).
Rechargeable and non-rechargeable cells
Electrochemical cells are the basis for all batteries. Batteries contain two separate half-cells.
The solutions are connected by a salt bridge or semi-permeable membrane which allows
ions to flow through without allowing complete mixing of the solutions. The electrodes are
connected to the terminals of the battery, and when the battery is connected to an
electrical device a current can flow.
If the reactions taking place in the half-cells are reversible, the battery is rechargeable. By
connecting the battery to another power supply with a larger emf, electrons and ions are
forced around the circuit in the opposite direction. This reverses the spontaneous chemical
reaction and hence recharges the battery.
If the reactions taking place in the half-cells are irreversible the battery is non-rechargeable.
Fuel Cells
A fuel cell is a cell in which a chemical reaction between a fuel and oxygen is used to create
a voltage. The fuel and oxygen flow into the cell continuously and the products flow out of
the cell. Therefore the cell does not need to be recharged.
The most widely used fuel cell is the hydrogen-oxygen fuel cell:
A fuel cell, like a regular electrochemical cell, consists of two half-cells connected by a semi-
permeable membrane. An aqueous solution of sodium hydroxide is used as the electrolyte.
The oxygen half-cell is more positive and therefore undergoes reduction. The hydrogen half-
cell is more negative and undergoes oxidation:
Hydroxide ions are generated in the oxygen half-cell and travel through the membrane into
the hydrogen half-cell, where they are used up.
H2 in
O2 in
OH-
H2O out
- The hydrogen-oxygen fuel cell produces water as the only product. It therefore does
not produce any of the greenhouse or polluting gases associated with combustion
engines. The process of generating hydrogen for use in fuel cells does produce a
small quantity of carbon dioxide, but much less than would be generated by a
combustion engine.
- Fuel cells are more efficient than combustion engines. Typically fuel cells are
approximately 50% efficient but combustion engines are approximately 20%
efficient.
However there are also a number of limitations of fuel cells as a way of producing energy:
- Hydrogen is a flammable gas with a low boiling point. It is therefore both difficult
and dangerous to store and transport. It can be stored as a liquid under pressure or
as a solid adsorbed to the surface of a solid, but both of these techniques are
expensive.
- As a result, obtaining hydrogen as a fuel is difficult and this means that people will
not buy hydrogen-powered vehicles.
- Fuel cells use toxic chemicals in their manufacture
- Fuel cells have a limited lifetime
Redox Titrations
Fe2+(aq) Fe3+(aq) + e
MnO4- (aq) + 8H+(aq) + 5Fe2+(aq) Mn2+(aq) + 4H2O(l) + 5Fe3+(aq)
C2O42-(aq) 2CO2(g) + 2e
2MnO4- (aq) + 16H+(aq) + 5C2O42-(aq) 2Mn2+(aq) + 8H2O(l) + 10CO2(g)
ii) Since the MnO4- ion is only an effective oxidising agent in acidic medium, it is
necessary to add excess acid to the conical flask before carrying out the titration.
Sulphuric acid is generally used for this purpose. Hydrochloric acid should not be used since
Cl- is a reducing agent and will react with the MnO4- before the MnO4- can react with the
reducing agent under investigation. Nitric acid should not be used as NO3- is an oxidizing
agent and will react with the reducing agent before the MnO4- can. Ethanoic acid should not
be used as it is week acid and does not release enough H+ ions.
iii) The KMnO4 solution is generally placed in the burette. This causes two problems:
- the intense colour of KMnO4 means that it is very difficult to see the graduation marks
on the burette, and so it is difficult to read accurately.
- The KMnO4 reacts slightly with the glass, causing a slight stain if the burette is used too
often.
The reason the KMnO4 is placed in the burette is as follows:
As the KMnO4 is added to the solution under investigation, it is immediately decolorised by
the reducing agent. The end-point is detected by the failure of the purple colour to
disappear - a pink colour persists in the conical flask, indicating that the MnO4- ions are no
longer being reduced. This permanent pink colour is easily detected.
If the KMnO4 were in the conical flask, it would slowly decolorise until the solution became
completely colourless. The gradual disappearance of the pink colour is much harder to
detect than the sudden appearance of the pink colour, and for this reason the KMnO 4 is
always placed in the burette, despite the difficulties it presents in reading the burette.
5.3 Transition elements
Periodic table D block:
Starting with the atomic numbers of these d block elements, you ought to be able to
correctly build up the electron configurations of these elements.
Up to Argon Z=18, all the metals have the same electron configuration. Things only get
tricky beyond that number. For example, iron Z= 26 so as the 4s fills before the 3d that
leaves 6 electrons in the 3d and an electron configuration of :
Fe: 1s2 2s2 2p6 3s2 3p6 3d6 4s2
But look at Chromium Z=24 how do the six electrons fill the 3d and 4s?
Half filled subshells confer an added degree of energetic stability to the atom so chromium
has 3d5 4s1
Cr: 1s2 2s2 2p6 3s2 3p6 3d5 4s1
Transition elements are mostly those elements or their ions with incomplete outer d subshell.
These metals exhibit variable oxidation states due to the fact that the 4s energy level and
the 3d energy level are very close in value so that the metals can bond to other elements
using electrons from both the 4s and the 3d levels.
Below are the 3d and 4s electron arrangements for the stable oxidation states of these
metals
Higher oxidation states of the transition metals are stabilised as oxo anions i.e the metal ion
is combined with oxide ions. For example:
Orange Dichromate (VI) Cr2O72—
Yellow Chromate (VI) CrO42—
Black Manganese (IV)oxide MnO2
Yellow Metavanadate (V) VO3—
Purple Manganate(VII) MnO4—
Green Manganate(VI) MnO42—
COMPLEX IONS
A complex ion is an ion comprising one or more ligands attached to a central metal cation
by means of a dative covalent bond.
A ligand is a species which can use its lone pair of electrons to form a dative covalent bond
with a transition metal. Examples of ligands are H2O, NH3, Cl-, OH-, CN-,
Cations which form complex ions must have two features:
- they must have a high charge density, and thus be able to attract electrons from ligands.
- they must have empty orbitals of low energy, so that they can accept the lone pair of
electrons from the ligands.
Cations of d-block metals are small, have a high charge and have available empty 3d and 4s
orbitals of low energy. They thus form complex ions readily.
The number of lone pairs of electrons which a cation can accept is known as the
coordination number of the cation. It depends on the size and electronic configuration of
that cation, and also on the size and charge of the ligand. 6 is the most common
coordination number, although 4 and 2 are also known.
Examples of complex ions are [Fe(H2O)6]2+, [CoCl4]2-, [Cu(NH3)4(H2O)2]2+. Note that the
formula of the ion is always written inside square brackets with the overall charge written
outside the brackets.
Some ligands are capable of forming more than one dative covalent bond per ligand. These
are known as multidentate ligands. Examples are ethanedioate (C2O42-) and 1,2-
diaminoethane (H2NCH2CH2NH2), both of which donate 2 lone pairs per ligand and are said
to be bidentate. One unusual ligand, known as edta4-, can form 6 dative covalent bonds per
ligand. It is thus said to be hexadentate. Ligands such as H2O, Cl- and CN- form only one
dative covalent bond per ligand and are said to be monodentate.
With polydentate ligands it often appears that the coordination number of the complex is 1
or 3, when in fact the coordination number is 6 as normal - it is just that each ligand is
bonded twice. Some examples of complex ions are:
6-coordinate complexes are all octahedral, and are formed with small ligands such as H2O
and NH3. They can thus be drawn as follows:
2+ 3+ 2+
H2.O. .NH
. 3 H2.O.
3- 2-
O
CH2 3+ O CH2
O C
C
C
.O. O CH2 .NH
. 2 CH2
.N. CH2
O
:O
O: C
O: :O C H2N: :NH2 CH2 O
C
Cu
CH2
Fe
C Cr O: :N CH2
O: :O
O ..
.. CH2
C O H2N: :NH2 O
CH2
O C ..
CH2 NH2 C
O CH2 O
4-coordinate complexes are generally tetrahedral, and are formed with larger ligands such
as Cl-. Larger ligands cannot fit around the transition metal so easily and hence form smaller
complexes. They can be drawn as follows:
[CoCl4]2-
2-
.Cl.
Co
. .
Cl . . Cl
..
Cl
Some 4-coordinated complexes however, especially if they involve Pt, are square planar:
Pt(NH3)2Cl2
Cl NH3
Pt
Cl NH3
2-coordinate complexes are in general linear, and are formed with Ag+ ions. They can be
drawn as follows:
[Ag(NH3)2]+
+
H3N: Ag :NH3
The rules covering the likely coordination number of transition metal complexes are:
c) Chloride ions and other large ions form tetrahedral complexes with a coordination
number of 4;
d) Most other transition metal complexes are octahedral with a coordination number
of 6.
Representation
When metal ions are in solution, they are usually represented as the simple ion, such as
Fe2+(aq), Co2+(aq), Cr3+(aq) or Fe2+(aq).
This is, however, a simplified representation as all d-block cations and many other cations
with high polarising power exist as the hexaaqua complex, eg [Fe(H2O)6]2+.
Many complex ions exist in the solid state. In these cases the ligands are often written after
the rest of the compound, separated by a dot:
2+
H2O -
.. Cl
H2O: :OH2
Co
H2O: :OH2 -
.. Cl
H2O
The dot does not always, however, mean that there are ligands present; some salts contain
water of crystallisation, where the water is not a ligand but a link between the ions.
Eg in Na2CO3.10H2O, the water molecules are not behaving as ligands, but as water
molecules of crystallisation.
Eg in FeSO4.7H2O, six of the water molecules are behaving as ligands, and the seventh is a
water of crystallisation. It helps link the cation to the anion:
2+
H2O
..
H2O: :OH2 H -O O
Fe O S
H2O: :OH2 H-
O
.. O
H2O
Isomerism
Square planar complexes in which the ligands are not all identical can display a form of E-Z
isomerism (isomers different due to restricted rotation) known as cis-trans isomerism. The
most common example of this is in complexes which contain two each of two different
types of ligand – for example Pt(NH3)2Cl2. The identical ligands can either be adjacent to
each other or opposite each other:
Cl NH3
Pt
Cl NH3
Identical ligands adjacent to each other Identical ligands opposite each other
Z or cis isomer E or trans isomer
This molecule is known as cisplatin This molecule is known as transplatin
It is an anti-cancer drug It is not an anti-cancer drug
b) Octahedral complexes
i) Cis-trans isomerism
Octahedral complexes also show cis-trans isomerism when they contain four ligands (or two
bidentate ligands) of one type and two ligands of another type – for example [Cr(Cl2)(H2O)4]+
or [Cr(C2O4)(H2O)2]+. The two minority ligands can either be adjacent to each other or
opposite each other:
Optical isomerism
- Two bidentate ligands and two monodentate ligands (cis isomer only), eg [Co(C2O4)2Cl2]3-
[Co(edta)]2-
Isomer 1 Isomer 2
Colour
a) Explanation
When a cation forms a complex ion, the incoming ligands repel the electrons in the atom,
and thus they are raised in energy. Some of the d-orbitals, however, are repelled more than
others and the result is that the d-orbitals are split into 2 groups of orbitals, with three
orbitals being slightly lower in energy than the other two:
The difference in energy between these groups of orbitals is similar to the energy of visible
light. The energy of the light is related to the frequency of the light by the equation E = hf.
If these d-orbitals are partially filled, some of the electrons in the lower energy orbitals are
excited into the higher energy orbitals, and in doing so absorb the light that corresponds to
that frequency. The resultant light is deficient in the light of that frequency and thus
appears coloured.
hf
Transition metal ions are coloured because d-electrons can absorb light and get excited
into higher energy d-orbitals. The resultant light is thus missing certain frequencies and is
hence coloured.
- the d-orbitals must be partially filled. If the d-orbitals are empty (Eg Sc3+, Al3+) then there
are no electrons which can be excited into the higher energy d-orbitals and the ions will
be colourless. If the d-orbitals are full (Eg Cu+, Zn2+) then there are no empty orbitals into
which the electrons can be excited and the ions will be colourless.
b) Application
As transition metal ions can show a huge variety of colours, it is often possible to identify a
complex ion simply by its colour.
Chemical Reactions
Most metal cations exist as the hexaaqua complex in solution. Main group metals form
colourless ions but most transition metal ions are coloured.
a) Acid-base reactions
If the charge density of the cation is particularly high, the electron density in the aqua ligand
moves even closer to the cation and the bonds in the water are weakened. In such cases the
hydrogen in the water ligand can be lost as a proton.
+
2+
H H2O
..
H2O
..
H
H H2O: :O
H2O: :O
H Fe H
Fe +
H2O: :OH2
+ :O H2O: :OH2 + H O
H .. H
.. H2O
H2O
Eg [Fe(H2O)6]2+ == [Fe(H2O)5OH]+ + H+
Deprotonation is caused by the high charge density on the central cation, which weakens
the O-H bonds in the water ligands, and enables the H+ ( the proton) to leave.
The proton which is lost is given to a base. This can be water, hydroxide ions or ammonia.
The extent to which deprotonation takes place depends on the strength of the base.
i) Deprotonation by water
Water is a weak base. The hexaaqua complex will therefore behave as a weak acid and will
partially dissociate:
The greater the charge density on the central cation, the greater the extent of
deprotonation and the more acidic the solution. For example, solutions of iron (III) salts are
more acidic than solutions of iron (II) salts.
ii) Deprotonation by hydroxide ions
The hydroxide ion is a strong base. It will pull protons away from water ligands more than
water molecules, and more than one deprotonation will take place.
In all cases, the hydrated hydroxide will be formed:
Eg [Fe(H2O)6]2+(aq) + 2OH-(aq) == [Fe(H2O)4(OH)2](s) + 2H2O(l)
Iron (II) hydroxide
Eg [Cu(H2O)6]2+(aq) + 2OH-(aq) == [Cu(H2O)4(OH)2](s) + 2H2O(l)
Copper (II) hydroxide
Eg [Al(H2O)6]3+(aq) + 3OH-(aq) == [Al(H2O)3(OH)3](s) + 3H2O(l)
aluminium (III) hydroxide
Eg [Fe(H2O)6]3+(aq) + 3OH-(aq) == [Fe(H2O)3(OH)3](s) + 3H2O(l)
Iron (III) hydroxide
The hydroxides are all insoluble. Thus a precipitate is formed when sodium or potassium
hydroxide solution is added to any solution containing transition metal cations.
In some cases (eg Al3+), the hydroxide ions can remove even more protons, and
hydroxoanions are formed:
Al(OH)63-
Colourless
Metal hydroxides such as Al(OH)3(H2O)3, which dissolve in acid but and in excess alkali, are
said to be amphoteric.
Deprotonation by ammonia
Ammonia is also a stronger base than water, so can also cause deprotonation of the
hexaaqua complex and form the hydroxide precipitate:
The ammonia is not a sufficiently strong base to cause further deprotonation, so the
hydroxoanions are not formed with excess ammonia.
Carbonate ions are bases and can deprotonate the +3 ions to form the hydroxide precipate.
The carbonate ions are converted into carbon dioxide gas.
FeCO3 CuCO3
green green-blue
With hexaaqua complexes, ammonia acts as a base and facilitates deprotonation. Excess
ammonia, however, will undergo ligand exchange with some hydroxides, replacing aqua and
hydroxo ligands with ammine ligands.
The hydroxides of iron (II), iron (III) and aluminium do not dissolve in aqueous ammonia.
Co(NH3)62+ Cu(NH3)4(H2O)22+
Note than when ammonia replaces water as ligands, the coordination number does not
change. This is because water and ammonia are small ligands with no charge, so they
don’t get in each other’s way or repel each other too much. Therefore both form
octahedral complexes.
In the presence of concentrated hydrochloric acid, the chloride ions can replace the water
ligands in some complex ions and form an anionic complex:
These reactions are favoured because they cause an increase in entropy. There are 5 species
on the left hand side of the equation and 7 species on the right. The entropy of the system
thus increases.
This is counterbalanced, however, by the fact that more coordinate bonds (6) are broken
than are formed (4), and that chloride ligands do not form very strong coordinate bonds.
The reaction is thus endothermic.
These reactions are generally readily reversible, and addition of water to the solution will
cause the chloride ligands to be replaced by aqua ligands. This reaction is used in the test for
water; blue cobalt chloride paper turns pink in the presence of water.
[CoCl4]2-(aq) + 6H2O(l) == [Co(H2O)6]2+(aq) + 4Cl-(aq)
blue pink
multidentate ligands such as H2NCH2CH2NH2, C2O42- and edta4- readily replace water ligands
in complex ions. The resulting complex ions always remain six coordinate:
These reactions are favoured because they cause an increase in entropy. There are always
less species on the left hand side of the equation than on the right. The entropy of the
system thus increases, and multidentate complexes are therefore more stable than
complexes involving monodentate ligands. This is known as the chelate effect.
The entropy increase is not counterbalanced by a decrease in coordination number as the
coordination number is still 6.
Ligand exchange in heamoglobin
Another important complex ion involving multidentate ligands is haemoglobin.
Haem is a complex ion consisting Fe2+ and a complex tetradentate ligand called porphyrin.
The complex is generally found with a protein called globin, which provides the fifth
coordinate bond, and a molecule of oxygen which forms the sixth bond. The complete six
coordinate complex is called haemoglobin. This structure is responsible for carrying oxygen
in the blood throughout the human body.
Fe2+ + porphyrin haem
haem + globin + O2 haemoglobin
Carbon monoxide is a similar size and shape to oxygen and forms a much stronger bond
with the iron. It thus diplaces the oxygen from the complex and reduces the blood’s ability
to carry oxygen. It is thus a very poisonous gas.
Summary of chemical reactions of complex ions
Many of these reactions are characterised by clear colour changes. A summary of the colour
changes occurring is in the table below:
Ion With NH3 or With excess With excess With conc. With
NaOH, not NaOH NH3 HCl Na2CO3
in excess
Since transition metals show a variety of transition states in their compounds, much of their
chemistry is dominated by movement between these transition states.
When the oxidation state changes, the colour changes as the electron distribution in the d-
orbitals is different. The colour is also affected by the ligands involved, as the type of ligand
affects the amount of splitting in the d-orbitals.
a) Iron
The Fe2+ ion is thus a reducing agent and the Fe3+ ion is an oxidising agent. Concentrations of
Fe2+ in solution can be determined by titration with oxidising agents.
b) Manganese
Manganese can exist in a number of oxidation states, but is most stable in an oxidation state
of +2, +4 or +7
In the +7 oxidation state it exists as the intense purple ion MnO4-. This can be reduced to the
pale pink Mn2+ in acidic solution:
Vanadium forms stable compounds in 4 different oxidation states, +2, +3, +4 and +5.
Oxidation state +5 +4 +3 +2
All vanadium (V) compounds can be reduced to the +4, +3 and then +2 oxidation state by
strong reducing agents such as zinc in acid solution:
VO2+(aq) + 4H+(aq) + 3e V2+(aq) + 2H2O(l)
Zn(s) Zn2+(aq) + 2e
The reaction proceeds via the +4 and +3 oxidation states, so the colour change observed is
yellow(VO2+) green (VO2+ and VO2+) blue (VO2+) green (V3+) violet (V2+).
d) Silver
Diamine silver (I) has the formula [Ag(NH3)2]+ and is the active ion in Tollen’s reagent.
It is reduced to silver by reducing sugars and aldehydes (but not ketones). It produces a
characteristic silver mirror on the side of the test-tube and this is used as the basis of the
test for aldehydes. The silver (I) ion is reduced to silver and the aldehyde is oxidized to a
carboxylic acid:
[Ag(NH3)2]+ + e- Ag + 2NH3 (x2)
R-CHO + H2O RCOOH + 2H+ + 2e-
2[Ag(NH3)2]+ + R-CHO + H2O Ag + 2NH3 + R-COOH + 2H+
i) pH
The relative tendency of a transiton metal ion to undergo oxidation and reduction often
depends dramatically on the pH of the solution. In general, oxidation is favoured by alkaline
conditions and reduction is favoured by acidic conditions:
The ability of transition metals to form more than one stable oxidation state means that
they can accept and lose electrons easily. This enables them to catalyse certain redox
reactions. They can be readily oxidised and reduced again, or reduced and then oxidised
again, as a consequence of having a number of different oxidation states of similar stability.
a) Homogeneous catalysis
Homogeneous catalysis involves aqueous transition metal ions catalysing reactions, often
between two anions. The cation reacts with each anion in turn, thus avoiding the need for a
direct collision between two anions (this is difficult since they repel each other).
One of the products in this reaction, Mn2+(aq), behaves as a catalyst and thus the reaction is
slow at first but is much faster after a little of the products are formed.
b) Heterogeneous catalysis
A heterogeneous catalyst is a catalyst in a different phase from the reactants. In most cases,
the catalyst is a solid and the reactants are liquids or gases.
The reaction occurs at active sites on the catalyst surface. The catalyst therefore needs to
have a large surface area to be effective, which in turn means it needs to be very thinly
spread out in order to reduce its cost, and might need a special support. Catalytic converters
in cars, for example, use rhodium (Rh) on a special ceramic support
Heterogeneous catalysts can be poisoned by impurities, which are often present in the raw
materials used. These impurities bond very strongly to the catalyst surface and block the
active sites. This reduces the efficiency of the catalyst, making the process less economic
and requiring the catalyst to be regularly replaced, which can be expensive.
Isomers are compounds with the same molecular formula but different structures.
Isomerism can be divided into two types; structural isomerism and stereoisomerism.
There are three types of structural isomerism; positional isomerism, chain isomerism and
functional isomerism.
There are two types of stereoisomerism: geometrical isomerism and optical isomerism.
isomerism
structural
stereoisomerism
isomerism
W C Y
X C
W
z
Since the carbon atom is attached to four different groups, it is asymmetric and so cannot
be superimposed on its mirror image:
C X
W
z
These two mirror images cannot be interconverted without breaking covalent bonds.
Molecules which contain a carbon atom which is attached to four different groups are said
to be chiral. Chiral molecules cannot be superimposed on their mirror image.
Evidence for the delocalised model of the bonding in benzene is provided by data from
enthalpy changes of hydrogenation and carbon-carbon bond lengths
Resistance of benzene to bromination compared to alkenes
Alkenes tend to surcome to bromination easily, unlike benzene, this can be seen in
cyclohexene
As the pi-bond contains localised electrons, it produces an area of high electron density,
allowing it to repel the electrons in the Bromine bond, this induces a dipole making one
bromine atom partially positive and therefore attracting it to the negative double bond in
the cyclohexene. This then leaves a slightly positive intermediate molecule, which the
negative bromine molecule is attracted to, hence forming 1,2-dibromocyclohexane, by
addition.
In Benzene, there are no areas of high electron density, preventing it from being able to
polarise the bromine molecule, this means that a halogen carrier must be present in order
for it to even undergo a substitution reaction.
Reactions of benzene
(1) Nitration :
This is a relatively easy process to accomplish with a mixture of concentrated sulphuric and
concentrated nitric acids. This mixture reacts together to produce an unstable nitronium
ion, NO2+ :
HNO3 + 2H2SO4 → NO2+ + 2HSO4- + H3O+
This ion is attracted to the electron rich benzene ring - causing an electrophilic substitution
reaction to occur :
The products of the reaction are nitrobenzene and hydrogen/oxonium ions.
(2) Halogenation :
All normal unsaturated compounds, i.e. alkenes, will react with halogens, in the absence of
light, to give the dihalogenated addition product.
The nature of the benzene ring and its delocalised electrons prevents this sort of reaction
from occurring.
Aromatic compounds will react with halogens (i.e. Cl2 and Br2), however, they require a
catalyst - a metal halide (e.g. iron(III) bromide or aluminium chloride) or iron filings.
These catalysts act to polarise the halogen bond forming a d+ charge on a halogen atom (Cl
or Br)
This species is then able to react with the benzene ring in exactly the same manner as the
nitronium ion does in the nitration reaction
In aldehydes one of the groups attached to the carbon is a hydrogen atom and the other is
a hydrogen atom or an alkyl groups. In ketones both of the groups attached to the carbon
are alkyl groups:
H H H O
O O
H C C C C H
CH3 C H C
H H H H H
H H O H H H O H H
H C C C C H H C C C C C H
H H H H H H H
butanone pentan-2-one
2. Redox reactions
The redox reactions involving carbonyls have been discussed at AS level and are summarized
by the following diagram:
[O] X
[O] [R]
aldehydes [R]
ketones
[O] X
carboxylic
acids
a) oxidation reactions
Primary alcohols, secondary alcohols and aldehydes are oxidized using potassium
dichromate (K2Cr2O7) in sulphuric acid (H2SO4). Gentle warming is necessary to start the
reaction.
When making an aldehyde, care must be taken to prevent further oxidation to the
carboxylic acid. This is achieved by using distillation apparatus so that the aldehyde can be
distilled off as soon as it is formed.
The orange Cr2O72- is reduced to the green Cr3+.
Simplified equations for these oxidation reactions can be written using the symbol [O] as the
oxidant:
The most important difference in the reactions of aldehydes and ketones is the fact that
aldehydes can be readily oxidised to carboxylic acids but ketones are not readily oxidised.
This is used as the basis for two important distinguishing tests between aldehydes and
ketones.
Thus aldehydes give a grey precipitate or "silver mirror" if boiled with ammoniacal silver
nitrate. This is a standard test for an aldehyde, since ketones cannot be oxidised in this way.
Fehling’s solution is an alkaline solution containing Cu2+ ions. It is a mild oxidizing agent:
2Cu2+ + 2e + 2OH- Cu2O + H2O
It is also reduced by aldehydes, and the overall equation for the reaction is:
R-CHO + 4OH- + 2Cu2+ R-COOH + Cu2O + 2H2O
The blue Cu2+ is reduced to the brick-red precipitate Cu2O on gentle warming. This is
another standard test for an aldehyde.
b) reduction reactions
Aldehydes and ketones can be reduced to primary and secondary alcohols respectively using
the reducing agent sodium tetrahydroborate (III), NaBH4.
Simplified equations for these reduction reactions can be written using the symbol [H] as
the reductant:
-
+ O
C
Nu:
Carbonyls therefore tend to undergo nucleophilic addition.
Mechanism of nucleophilic addition:
NB
HCN is a very poisonous gas. It is not safe to carry out this reaction in the
laboratory. HCN is not stored, but made in situ by mixing KCN and HCl.
OH
O
R1 C + HCN R1 C R2
R2
CN
-
+ O
R1 C
R2
:CN-
Step 3: The O atom picks up the H+ ion:
.. H
O-
R2 C CN
R1
- OH
O
+ +
..- H+
- O
CH3CH2 C CH3CH2 C CN
H CN
CH3CH2 C CN
H H
H
:CN-
OH
O
R1 C + 2[H] R1 C H
R2
R2
NaBH4 contains hydrogen in a negative oxidation state, which can therefore behave as a
nucleophile.
Step 1: the H- ion attacks the δ+ carbon atom:
-
O O-
+
R1 C R2 C H
R2
- R1
H:
-
H
.. - H
O O O OH
+
-
CH3 C CH3 C H CH3 C H + OH
CH3 CH3
CH3
-
H:
Cl
1-chlorobutane 2-chlorobutane
Cl
CH3 CH3
Cl Cl
C C
C 2H 5 C2H5
CH3 CH3
H H
Optical isomers show identical physical and chemical properties in most respects.
In fact there is only one physical method by which they can be distinguished.
Plane-polarised light is light which has been filtered into a two-dimensional plane:
Light source plane-polarised light
If plane-polarised light is passed through a liquid containing a chiral molecule, the plane of
the light will be rotated. This can be detected using a polarimeter.
Molecules which are not chiral will not rotate the plane of plane-polarised light.
Chiral molecules will rotate plane-polarised light. Two optical isomers will rotate plane
polarised light equally, but in opposite directions.
It is this difference in physical properties which enables them to be distinguished.
It is not possible to predict the direction in which a particular optical isomer will rotate plane
polarised light, but two optical isomers will always rotate plane polarised light in opposite
directions.
A substance which can rotate plane polarised light is said to be optically active.
The isomer which rotates plane polarised light clockwise is given the prefix (+) or D-. The
isomer which rotates plane polarised light anticlockwise is given the prefix (-) or L-.
Optical isomers show identical chemical properties in most reactions. However, certain
biochemical processes require the molecule to have a specific orientation of groups. Many
drugs and enzymes are chiral and so only one of the optical isomers will be able to interact
effectively with the target molecule in the body. Different optical isomers may therefore
have very different biochemical effects.
iv) racemates
Optical isomers are often found together in a mixture in equal quantities. The opposite
effect they have on the rotation of plane polarised light will thus result in no overall
rotation. An equimolar mixture of two optical isomers will thus have no effect on plane
polarised light and is thus not optically active.
Such mixtures are said to be racemic mixtures or racemates.
A racemic mixture is an equimolar mixture of two optical isomers. Racemic mixtures are not
optically active.
Thus chiral molecules will only show optical activity if one isomer is present in greater
quantities than the other.
It is possible to predict whether a single enantiomer or a racemate will be produced,
If the chiral substance is produced by an addition reaction, then the product will always be a
racemate as the attacking nucleophile or electrophile can attack the planar molecule from
above or below with equal probability:
Eg formation of 2-bromobutane from but-2-ene (electrophilic addition)
The bromide ion can attack the carbocation from above or below, producing an equimolar
mixture of the two enantiomers – ie a racemate:
H3C H
C C CH3 H Br
H CH3 + CH3
H C C
CH3 H C C
H Br H
H
H
Br CH3
CH3 H CH3
+ CH3
H C C
CH3 H C C
H H
H
Br Br
H+
O-
O
H CN CH3 C
C
CH3 CN
CH3
-CN H
or
-CN
O CN
CH3 C
C H+
H O-
CH3
If the chiral molecule is produced by a substitution reaction and the starting molecule is a
single enantiomer, then the attacking species can only attack from one side and a single
enantiomer will be produced.
Eg preparation of butan-2-ol from 2-bromobutane
CH3 CH3
-
OH
C C C2H5 -
+ Br
C2H5 Br HO
H
H
The hydroxide ion always attacks from behind, always producing the same enantiomer.
Carboxylic acids can be prepared by the oxidation of alcohols or aldehydes, and the
hydrolysis of nitriles
An excess of the oxidising agent must be used, and the aldehyde formed as the half-way
product should remain in the mixture. The alcohol is heated under reflux with an excess of
the oxidizing agent. When the reaction is complete, the carboxylic acid is distilled off.
The full equation for the oxidation of ethanol to ethanoic acid is as follows:
Alternatively, you could write separate equations for the two stages of the reaction - the
formation of ethanal and then its subsequent oxidation.
2. Hydrolysis of nitriles
The nitrile is heated under reflux with dilute hydrochloric acid. Instead of getting an
ammonium salt as you would do if the reaction only involved water, you produce the
free carboxylic acid.
For example, with ethanenitrile and hydrochloric acid you would get ethanoic acid
and ammonium chloride.
Summary on preparation of carboxylic acids
The reaction happens in two stages - first to form an aldehyde and then a primary alcohol.
Because lithium tetrahydridoaluminate reacts rapidly with aldehydes, the reaction gors to
completion. The full equation is :
(ii)
Mechanism:
First there is a nucleophilic attack on the very positive carbon atom by an lone pair from the
oxygen of the alcohol.
iv amines
This is a nucleophilic addition/elimination reaction.
Produces amides and ammonium chlorides.
Mechanism- 2 stages:
In the addition stage, an amine molecule becomes attached to the carbon in the acyl chloride.
As the lone pair on the nitrogen approaches the fairly positive carbon in the acyl chloride, it
moves to form a bond with it. In the process, the two electrons in one of the carbon-oxygen
bonds are repelled entirely onto the oxygen, leaving it negatively charged.
The elimination stage of the reaction happens in two steps. In the first, the carbon-oxygen
double bond reforms. As the electron pair moves back to form a bond with the carbon, the
pair of electrons in the carbon-chlorine bond are forced entirely onto the chlorine to give a
chloride ion.
The amine molecule will more likely remove the hydrogen ion and make acylammonium
chloride
Hydrolysis of esters
In alkaline conditions- This reaction is known as "saponification"
because it is the basis of making soap from glycerol triesters in fats.
Step 1:
The hydroxide nucleophiles attacks at the electrophilic C ofthe ester C=O,
breaking the π bond and creating the tetrahedral intermediate.
Step 2:
The intermediate collapses, reforming the C=O
results in the loss of the leaving group the alkoxide, RO-, leading to the
carboxylic acid.
Step 3:
An acid / base reaction. A very rapid equilibrium where the alkoxide,RO-
functions as a base deprotonating the carboxylic acid, RCO2H
In acidic conditions
Step 1:
An acid/base reaction. Since we only have a weak nucleophile and a poor
electrophile we need to activate the ester. Protonation of the ester
carbonyl makes it more electrophilic.
Step 2:
The water O functions as the nucleophile attacking the electrophilic C in the
C=O, with the electrons moving towards the oxonium ion, creating the
tetrahedral intermediate.
Step 3:
An acid/base reaction. Deprotonate the oxygen that came from the water
molecule to neutralise the charge.
Step 4:
An acid/base reaction. Need to make the -OCH3 leave, but need to convert
it into a good leaving group first by protonation.
Step 5:
Use the electrons of an adjacent oxygen to help "push out" the leaving
group, a neutral methanol molecule.
Step 6:
An acid/base reaction. Deprotonation of the oxonium ion reveals the
carbonyl C=O in the carboxylic acid product and regenerates the acid
catalyst.
6.2 Nitrogen compounds polymers and synthesis
Amines
Amines are derivatives of ammonia whereby one or more hydrogen atoms have been
replaced by alkyl groups. Amines can be primary, secondary or tertiary depending on how
many hydrogen atoms have been replaced.
Naming amines
The naming of amines is based around the length of the longest alkyl chain connected to the
nitrogen atom. Below are some examples of amines:
Primary amine This is butylamine, a primary amine. The -butyl part
comes from the four carbon alkyl group while the -
amine part is due to the secondary amine group,
NH2
Secondary amines
This is N-methylpropylamine. The -propyl part comes from the longer three carbon chain
while the -methyl part is from the other CH3 group. The preceding N indicates that the
methyl group is attached to the nitrogen atom.
Tertiary amines
This is N,N-diethylpropylamine. The -propyl part comes from the longer three carbon chain
while the diethyl is from the two ethyl groups connected to the nitrogen atom.
Types of amides
Naming amines
Reactions of primary aliphatic amines, using butylamine as an
example, with:
i water to form an alkaline solution
Amines react with water and act as weak bases in solution.
Butylamine does dissolve in water due to the NH2 group forming Hydrogen bonds with
water. Butylamine solution is alkaline because the NH2 group accepts Hydrogen ions.
Equation:
iv halogenoalkanes
Amines are also nucleophiles (lone pair on N) and can attack halogenoalkanes to produce a
2° amine. This too is a nucleophile and can react further producing a 3° amine and,
eventually an ionic quarternary ammonium salt.
The nitrobenzene has been reduced by gaining electrons in the presence of the acid.
The electrons come from the tin, which forms both tin(II) and tin(IV) ions.
All you need to do is to remove the hydrogen ion from the -NH3+ group.
Sodium hydroxide solution is added to the product of the first stage of the reaction.
Summary
Polyamides
All polyamides are made by the formation of an amide function to link two molecules of
monomer together. The monomers can be amides themselves
Polyamides such as nylon are also condensation polymers. The formation of a polyamide
follows the same procedure as in the synthesis of a simple amide.
An example of this condensation reaction is the formation of Terylene which is made from
the monomers ethane-1,2-diol and benzene-1,4-dicarboxylic acid.
(iii) Amino acids
Polyamides can also be formed from amino acids, which contain both the amine group
(−NH2) and a carboxyl group (−COOH). Polypeptides and proteins are polyamides formed
from one type of monomer unit. The general formation is shown below:
Amino acids
Amino acids are compounds which contain both an amine group (−NH2) and a carboxylic
acid group (−COOH). They are important in the human body as they are building blocks for
proteins and peptides. They also act as enzymes and antibodies.
α-amino acids
α-amino acids have a basic amine group and an acidic carboxyl group bonded to the same
carbon atom. The general formula is RCH(HN2)COOH. The body has 20 amino acids that can
be arranged to form proteins. The simplest α-amino acid is glycine which has a hydrogen
atom as the −R group.
Other examples of α-amino acids include alanine (2-aminopropanoic acid) and glutamic acid
(2-aminopentanedioic acid).
Zwitterions
The acidic carboxyl group and the basic amine group in an amino acid can interact with each
other to form an internal salt known as a zwitterion. In this process:
o A proton is transferred from the acid carboxyl group to the basic amine group.
o The zwitterion has no overall net charge as the positive and negative charges cancel
each other out.
Isoelectric point
The isoelectric point is the pH at which there is no net electrical charge. At this pH, a
zwitterion is formed. Different amino acids have different isoelectric points. A higher
isoelectric point indicates the −R group may contain −NH2 while a lower isoelectric point
could show the presence of a −COOH group.
o At a pH less acidic than the isoelectric point, the amino acid behaves as an acid and
donates a proton to the base. This results in a negatively charged ion.
Peptides
A peptide is a compound containing two or more amino acids joined by a peptide
bond.
When two amino acids join together, a dipeptide is formed through the elimination
of water in a condensation reaction.
It is also possible to form a dipeptide by reacting two of the same amino acids
together. The amine group on one of the molecules reacts with the carboxyl group
on the other.
Polypeptides
A polypeptide is a long chain of amino acids joined together with peptide bonds. A
polypeptide can be formed through a series of condensation reactions of amino
acids. A dipeptide is a molecule formed from two amino acids joined by a single
peptide bond.
Acid hydrolysis
Polypeptides can be hydrolysed using aqueous acid. In this reaction the peptide
bond is broken forming two positively charged amino acids. This reaction is
traditionally carried out by heating under reflux with 6 mol dm−3hydrochloric acid
for 24 hours.
Alkaline hydrolysis
Polypeptides can be broken down through alkaline hydrolysis. A solution of sodium
hydroxide can be used just above 100° C. In this reaction the polypeptide is broken
down into salts.
In the reaction below a long amino acid chain is broken through alkaline hydrolysis.
Polypeptides can be hydrolysed to form the constituent amino acids, which can be
separated by chromatography
Percentage Composition
Given the % of each element in the compound:
1 – Divide each percentage by the RAM of the element.
2 – Put the results into a ratio.
3 – Divide through by the smallest answer to give a simple whole number ratio.
% → % ÷ RAM → X:Y:Z
IR spectroscopy
- The wavenumber of different peaks correspond to different bonds absorbing
energy in the molecule which can be looked up in a data book.
Mass spectroscopy
- Parent peak ion gives RMM of compound.
- Particularly abundant peaks show where a group of the compound has broken off.
NMR
- No. of peaks = No. of H environments.
- Splitting number shows 1 more than the number of adjacent H environments.
- Area beneath graph represents number of H’s in that environment.
For example K2Cr2O7 is highly toxic and carcinogenic so it is very hazardous. But it
was used in breathalysers in a sealed tube so the risk to the subject was very low.
Common hazards:
- Corrosive
- Flammable
- Toxic
- Caustic
- Carcinogenic
- Explosive
– Refluxing
Use a condenser while heating to minimise the loss of product while allowing the
reaction to go to completion.
3 - Solvent extraction
Separating funnels can be used to separate immiscible liquids. Different solvents are
added to dissolve the product in them and then separated out at the bottom of the
funnel.
4 - Recrystallization
- Dissolve impure crystals in the minimum amount of hot solvent possible (this
creates a saturated solution so the crystals are more likely to re-precipitate out).
- Cool and put through Buchner funnel.
- Rinse with ice cold water (this rinses off any insoluble purities stuck to the surface).
- Dry the product.
5 - Drying
Can be done in an oven or padded using filter paper to remove liquid from crystals
etc. Alternatively use anhydrous CaCl2 to absorb any water.
6 - Distillation
Used to separate mixtures with different boiling points; requires thermometer and
Liebig condenser.
7 - Steam distillation
It is used to separate organic products which might otherwise decompose from
sustained heating.
10 (Extra) - Shaking
Shaking mixtures can expose them to the air and so in some cases this is enough to
cause oxidation from Oxygen in the air.
Reduction:
- LiAlH4 dissolved in dry ether reduces carbonyls and carboxylic acids to alcohols.
- Sn & conc. HCl reduces –NO2 to –NH2
Oxidation:
-Na2Cr2O7 and sulphuric acid oxidise to carbonyls or carboxylic acids. Colour change
from orange to green.
Making –OH Groups:
- Adding KMnO4 to alkenes will create 2 –OH groups around where the double bond
was.
You also observe a colour change from purple to colourless.
Adding on Halogens:
- A diatomic halogen molecule or a hydrogen halide will react with alkenes to add on
2 or 1 halogen respectively. (Remember Markovnikov’s rule with HX)
- Alcohol/Carboxylic acids and PCl5 adds –Cl in place of –OH & gives off steamy fumes
of HCl.
- Halogens with an FeBr3 catalyst will substitute halogens onto a benzene ring.
Esterification:
- Add an alcohol to a carboxylic acid or acyl chloride (with an acid catalyst like H2SO4)
to get a condensation reaction resulting in an ester.
Hydrogenation:
- Benzene and alkenes both have an addition reaction when Hydrogen is added in
the presence of a Nickel catalyst.
Grignard reagents
Grignard reagents are formed by the reaction of magnesium metal with alkyl or
alkenyl halides. They’re extremely good nucleophiles, reacting with electrophiles
such as carbonyl compounds (aldehydes, ketones, esters, carbon dioxide, etc) and
epoxides. They’re also very strong bases and will react with acidic hydrogens (such as
alcohols, water, and carboxylic acids).
Grignard reagents are made through the addition of magnesium metal to alkyl or
alkenyl halides. The halide can be Cl, Br, or I (not F). It’s slightly easier to make
Grignards from the iodides and bromides
1) Principles of separation
Chromatography always involves moving a solvent (called the mobile phase) along or
through a solid or viscous liquid (called the stationery phase). Different components of the
mixture have different tendencies to adsorb onto (or dissolve in) the stationery phase, and
hence move through the apparatus at different speeds relative to the mobile phase. This is
how the components are separated.
- thin-layer chromatography
In thin-layer chromatography a liquid solvent is allowed to flow up a piece of TLC
plate coated with a solid. The mixture is placed in a small area on the plate and
allowed to flow up the plate with the solvent. The distance travelled by a component
compared to the solvent is called the retention factor and can be used to identify
the component.
- column chromatography
In column chromatography a column is packed with a solid and a solvent moves
down the column. The component is added to the solvent at the top of the column.
The time it takes for a component to exit the base of the column is called the
retention time and can be used to identify the component
- gas chromatography
In gas chromatography a gaseous mixture is allowed to flow, under pressure and at
high temperature, through a column lined with a solid or a solid coated with a liquid.
Volatile liquids can also be vaporised and then allowed to flow through the column.
The time it takes for a component to exit the column is called the retention time and
can be used to identify the component.
The separation of the components depends on the balance between its solubility in the
mobile phase and its retention by the stationary phase. A component which is highly soluble
in the mobile phase and not well retained by the stationery phase will have a high retention
factor and a small retention time. A component which is not very soluble in the mobile
phase and well retained by the stationery phase will have a low retention factor and a high
retention time.
The retention factor can be calculated from the chromatogram produced on the TLC plate
after the experiment. It is defined as: distance moved by component
distance moved by solvent front
GC
All forms of chromatography involve a stationary phase and a mobile phase. In all the other
forms of chromatography you will meet at this level, the mobile phase is a liquid. In gas-
liquid chromatography, the mobile phase is a gas such as helium and the stationary phase is
a high boiling point liquid adsorbed onto a solid.
How fast a particular compound travels through the machine will depend on how much of
its time is spent moving with the gas as opposed to being attached to the liquid in some
way.
Diagram
The time taken for a particular compound to travel through the column to the detector is
known as its retention time. This time is measured from the time at which the sample is
injected to the point at which the display shows a maximum peak height for that compound.
Different compounds have different retention times. For a particular compound, the
retention time will vary depending on:
the boiling point of the compound. A compound which boils at a temperature higher
than the column temperature is going to spend nearly all of its time condensed as a
liquid at the beginning of the column. So high boiling point means a long retention
time.
the solubility in the liquid phase. The more soluble a compound is in the liquid phase,
the less time it will spend being carried along by the gas. High solubility in the liquid
phase means a high retention time.
the temperature of the column. A higher temperature will tend to excite molecules
into the gas phase - either because they evaporate more readily, or because they are
so energetic that the attractions of the liquid no longer hold them. A high column
temperature shortens retention times for everything in the column.
HPLC
HPLC is a type of liquid chromatography used to separate a mixture of compounds. The
sample is forced through a column packed with a stationary phase composed of irregularly
shaped particles and a porous membrane at high pressure.
When a mixture of compounds is introduced to the column, the molecules interact with the
column packing according to their affinities and they then travel to the stationary phase. A
compound with less affinity towards the stationary phase travels faster.
The compounds are therefore separated.
HPLC is faster, more efficient, highly sensitive and easier than standard liquid
chromatography.
HPLC and GC may be used in conjunction with mass spectrometry, in applications such as
forensics or drugs testing in sport
Mass Spectrometry
Working out relative molecular mass of compounds
Vaporised organic samples are passed through the ionisation chambers of the mass
spectrometer and this allows electrons to knock an electron off the organic molecule. The
organic molecule forms a positive ion called the molecular ion
Molecular ions can then be used to find relative formula mass
In the mass spectrum, the heaviest ion (the one with the greatest m/z value) is likely to be
the molecular ion.
In the spectra peaks above, he largest value is 72 so an assumption is made that this is the
molecular ion and therefor the relative formula mass of the sample.
Using accurate isotopic masses will aid differentiation between rounded up relative formula
masses of compounds.
In practice, a sample is placed in an electromagnet. The field strength is varied until the
radio waves have the exact frequency needed to make the nuclei flip over and spin in the
opposite direction. This is called resonance and can be detected electronically and recorded
in the form of a spectrum.
C-13 NMR
Naturally-occurring carbon is composed of 98.9% 12C and 1.1% 13C (along with extremely
small, and variable, amount of 14C). Although the 12C : 13C ratio is very small for
compounds like methane which contain just one carbon atom, the ratio increases in
proportion to the number of carbon atoms, as the chances of a molecule containing at least
one 13C atom increase
13C NMR spectroscopy provides information about the positions of 13C atoms in a molecule
Data from 13C NMR spectroscopy can be used to:
i predict the different environments for carbon atoms present in a molecule, given values of
chemical shift, δ
The position of the NMR signal relative to this standard is called the chemical shift of the
proton. Hydrogen nuclei in particular environments have characteristic chemical shifts.
Some examples are given in the table below.
ii justify the number of peaks present in a 13C NMR spectrum because of carbon atoms in
different environments
Interpreting 1NMR spectra
The 1H NMR spectrum of ethanal is shown below.
The spectrum trace has a peak at 9.7, which corresponds to the CHO proton and a peak at
2.1 which corresponds to the three protons in the CH3 group. The area under the CH3 peak
is three times larger than that under the CHO peak as it indicates the relative number of
protons in the different environment. The integrated trace gives this information more
directly, as it goes up in steps which are proportional to the number of protons
Worked example
The NMR spectrum of a compound which has the molecular formula C3H8O is shown below.
(a) Draw the full structural formulas and give the names of the three possible isomers of C3H8O.
(b) Identify the substance responsible for the peak at 0 ppm and state its purpose.
(c) Identify the unknown compound from the number of peaks in the spectrum.
(d) Identify the group responsible for the signal at 0.9 ppm.
(c) For each structure, I-IV identifies the different environments of the H atoms in the
molecule. 1-3 represents the number of atoms in each environment. There are four peaks in
the spectrum. Propan-1-ol has four peaks with the correct areas.
(d) Peaks at 0.9 ppm correspond to the CH3 group.
The splitting of the peaks occurs as the effective magnetic field, experienced by particular
nuclei, is modified by the magnetic field produced by neighboring protons. This effect is
known as spin-spin coupling.
The magnetic field experienced by the protons in the methyl group, for example, depends
on the spin of the proton attached to the carbon atom of the carbonyl group (CHO). The
local magnetic field is increased when the magnetic field of the CHO proton is aligned with
the external field and decreased when aligned against it.
As the energy separation between the two spin states of a proton depends on the local
magnetic field, this results in two possible values for the energy difference between the two
nuclear energy levels for the CH3 protons. Instead of one signal corresponding to one
energy difference, ΔE, two signals corresponding to ΔEa and ΔEn are produced.
Each line corresponds to a different spin of the neighbouring proton. As they are both
equally likely, the lines are of equal intensity. In a similar way, the low-resolution peak
corresponding to the CHO proton is split due to the different magnetic fields produced by
the combinations of spin for the three protons of the neighbouring methyl group.
As there are two possible orientations for each proton, a total of 23 combinations are
possible, resulting in four different local magnetic fields. This produces four signals with
relative intensities 1, 3, 3, 1 – as shown in the table below
Worked example: Predict the splitting pattern produced by a neighboring CH2 group.
Solution: There are different combinations.
Three lines are produced with relative intensities of 1, 2, 1. The splitting patterns produced
from different numbers of neighboring protons can be deduced from Pascal's triangle and
are summarized in the table below.
When analysing high-resolution NMR spectra, the following additional points should be
noted:
protons bonded to the same atom do not interact with one another as they are equivalent
and behave as a group
protons on non-adjacent carbon atoms do not generally interact with one another
the O−H single peak in ethanol does not split unless the sample is pure. Rapid exchange of
the protons between ethanol molecules averages out the different possible spins.