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Releases: hms-dbmi/UpSetR

Release v1.4.0

03 May 04:51
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  • Allow custom y-axis label and scale
  • Keep spaces in set names when filling empty intersections
  • fixed bug for single set (degree of 1) intersection query when using fromExpression
  • Changed point shape to 16
  • Include set_size.show paramter and added documentation

Release v1.3.3

21 Mar 21:46
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  • Made element query compatible with check.names
  • Removed border from active query bars
  • Adjusted metadata heatmap and text title positions (centered title and removed 90 degree rotation)

Release v1.3.2

04 Jan 04:28
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  • update logarithmic axis and bar labels
  • allow decimal values for log scales
  • set intersection size axis min to 0 for log scales

Release v1.3.1

09 Nov 17:02
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  • Fixed log scale bugs
  • Allow users to label their own queries, which can be displayed in query legend
  • Fixed query legend positioning bug. Allows query legend to be placed on top or bottom of plot grid
  • Fixed warnings and notes from new ggplot2 release
  • Updated plot margin of intersection size bar plot

Release v1.3.0

19 Oct 00:42
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  • Introduce text scales for all plot axis labels, tick labels, set names, and numbers above the bars
  • Remove names.size parameter and replace with a text scale
  • Fix vignettes so plot size and text is appropriately scaled

Release v1.2.4

02 Sep 17:41
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  • Fix check.names bug so that it reorders the set size bar plot, not just the set labels
  • Show all intersections when nintersects is set to NA

Release v1.2.3

01 Aug 21:51
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  • Allow user to keep order of sets entered when using sets parameter
  • Updated Basic Usage vignette with example on how to do this

Release v1.2.2

24 Jun 16:11
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  • Support for log10 and log2 scale transformations

Release v1.2.1

01 Jun 17:16
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  • Updated vignettes
  • Adjusted metadata plot text size for ggplot2 update
  • Default gray88 color if matrix_rows metadata attribute used and no colors supplied
  • Fixed metadata error so that matrix_rows may be used alone
  • New link to UpSetR Shiny app in README

Release v1.2.0

31 Mar 21:29
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  • Options for set metadata heat map, boolean heat map, text, and bar plot
  • Allow for multiple set metadata plots
  • Option to color matrix background using metadata
  • Created set.metadata.plots vignette
  • Removed set metadata example from attribute.plots vignette
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