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General Chemistry
William J. Vining
State University of New York, Oneonta
Susan M. Young
Hartwick College
Roberta Day
University of Massachusetts, Amherst
Beatrice Botch
University of Massachusetts, Amherst
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General Chemistry © 2016 Cengage Learning
William J. Vining, Susan M. Young, Roberta Day,
WCN: 02-200-203
and Beatrice Botch
ALL RIGHTS RESERVED. No part of this work covered by the copyright herein may
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Contents
Unit Recap 51
Contents iii
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3 Stoichiometry
3.1 The Mole and Molar Mass
55
56
4 Chemical Reactions
and Solution Stoichiometry 93
3.1a Avogadro’s Number 56 4.1 Types of Chemical Reactions 94
3.1b Molar Mass 57
4.1a Combination and Decomposition Reactions 94
4.1b Displacement Reactions 95
3.2 Stoichiometry and Compound Formulas 60
3.2a Element Composition 60 4.2 Aqueous Solutions 97
3.2b Percent Composition 62
4.2a Compounds in Aqueous Solutions 97
3.2c Empirical Formulas from Percent Composition 63
4.2b Solubility of Ionic Compounds 99
3.2d Determining Molecular Formulas 65
3.2e Hydrated Compounds 67
4.3 Reactions in Aqueous Solution 101
3.3 Stoichiometry and Chemical Reactions 69 4.3a Precipitation Reactions and Net Ionic Equations 101
4.3b Acid–Base Reactions 104
3.3a Chemical Reactions and Chemical Equations 69
4.3c Gas-Forming Reactions 108
3.3b Balancing Chemical Equations 71
3.3c Reaction Stoichiometry 74
4.4 Oxidation–Reduction Reactions 110
3.4 Stoichiometry and Limiting Reactants 79 4.4a Oxidation and Reduction 110
4.4b Oxidation Numbers and Oxidation States 111
3.4a Limiting Reactants 79
4.4c Recognizing Oxidation–Reduction Reactions 113
3.4b Percent Yield 82
Contents iv
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5 Thermochemistry
5.1 Energy
135
136
6 Electromagnetic Radiation and the
Electronic Structure of the Atom 171
5.1a Kinetic and Potential Energy 136 6.1 Electromagnetic Radiation 172
5.1b Measuring Energy: Energy Units 137
6.1a Wavelength and Frequency 172
5.1c Principles of Thermodynamics 138
6.1b The Electromagnetic Spectrum 173
5.2 Enthalpy 140
5.2a Enthalpy 140 6.2 Photons and Photon Energy 174
5.2b Representing Energy Change 142 6.2a The Photoelectric Effect 174
5.3 Energy, Temperature Changes,
6.3 Atomic Line Spectra and
and Changes of State 143
the Bohr Model of Atomic Structure 176
5.3a Heat Transfer and Temperature Changes:
Specific Heat Capacity 143 6.3a Atomic Line Spectra 176
5.3b Heat Transfer Between Substances: 6.3b The Bohr Model 177
Thermal Equilibrium and Temperature Changes 146
5.3c Energy, Changes of State, and Heating Curves 148 6.4 Quantum Theory of Atomic Structure 180
Contents v
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7 Electron Configurations
and the Properties of Atoms 193 8 Covalent Bonding
and Molecular Structure 225
7.1 Electron Spin and Magnetism 194 8.1 An Introduction to Covalent Bonding 226
7.1a Electron Spin and the Spin Quantum Number, ms 194 8.1a Coulomb’s Law 226
7.1b Types of Magnetic Materials 194 8.1b Fundamentals of Covalent Bonding 227
7.2a Orbital Energies in Single- and Multielectron Species 196 8.2a Lewis Symbols and Lewis Structures 228
8.2b Drawing Lewis Structures 231
8.2c Exceptions to the Octet Rule 234
7.3 Electron Configuration of Elements 196 8.2d Resonance Structures 236
7.3a The Pauli Exclusion Principle 196
7.3b Electron Configurations for Elements in Periods 1–3 198 8.3 Bond Properties 238
7.3c Electron Configurations for Elements in Periods 4–7 201 8.3a Bond Order, Bond Length, and Bond Energy 238
7.3d Electron Configurations and the Periodic Table 205 8.3b Resonance Structures, Bond Order, Bond Length,
and Bond Energy 242
7.4 Properties of Atoms 207 8.3c Bond Energy and Enthalpy of Reaction 244
7.4a Trends in Orbital Energies 207
8.4 Electron Distribution in Molecules 245
7.4b Atomic Size 209
7.4c Ionization Energy 211 8.4a Formal Charge 245
7.4d Electron Affinity 212 8.4b Bond Polarity 247
8.4c Resonance Structures, Formal Charge,
7.5 Formation and Electron Configuration and Electronegativity 249
of Ions 213
8.5 Valence-Shell Electron-Pair Repulsion
7.5a Cations 213 Theory and Molecular Shape 253
7.5b Anions 217
7.5c Ion Size 219 8.5a VSEPR and Electron-Pair Geometry 253
8.5b Shape (Molecular Geometry) 256
Unit Recap 222 8.6 Molecular Polarity 259
8.6a Molecular Polarity 259
Contents vi
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9 Theories of Chemical Bonding
9.1 Valence Bond Theory
265
266
10 Gases
10.1 Properties of Gases
293
294
9.1a Tenets of Valence Bond Theory 266 10.1a Overview of Properties of Gases 294
10.1b Pressure 295
9.2 Hybrid Orbitals 267
10.2 Historical Gas Laws 297
9.2a sp3 Hybrid Orbitals 267
9.2b sp2 Hybrid Orbitals 269 10.2a Boyle’s Law: P 3 V 5 kB 297
9.2c sp Hybrid Orbitals 270 10.2b Charles’s Law: V 5 kC 3 T 298
9.2d sp3d Hybrid Orbitals 272 10.2c Avogadro’s Law: V 5 kA 3 n 300
9.2e sp3d2 Hybrid Orbitals 274
10.3 The Combined and Ideal Gas Laws 302
9.3 Pi Bonding 276
10.3a The Combined Gas Law 302
9.3a Formation of Pi Bonds 276 10.3b The Ideal Gas Law 303
9.3b Pi Bonding in Ethene, C2H4, Acetylene, C2H2, 10.3c The Ideal Gas Law, Molar Mass, and Density 304
and Allene, CH2CCH2 277
9.3c Pi Bonding in Benzene, C6H6 279 10.4 Partial Pressure and Gas Law
9.3d Conformations and Isomers 281
Stoichiometry 307
9.4 Molecular Orbital Theory 283 10.4a Introduction to Dalton’s Law of Partial Pressures 307
10.4b Partial Pressure and Mole Fractions of Gases 309
9.4a Sigma Bonding and Antibonding Molecular Orbitals 283 10.4c Gas Laws and Stoichiometry 310
9.4b Pi Bonding and Antibonding Molecular Orbitals 284
9.4c Molecular Orbital Diagrams (H2 and He2) 284 10.5 Kinetic Molecular Theory 312
9.4d Molecular Orbital Diagrams (Li2–F2) 285
9.4e Molecular Orbital Diagrams (Heteronuclear Diatomics) 289 10.5a Kinetic Molecular Theory and the Gas Laws 312
9.4f Molecular Orbital Diagrams (More Complex Molecules) 289 10.5b Molecular Speed, Mass, and Temperature 314
10.5c Gas Diffusion and Effusion 317
Unit Recap 290 10.5d Nonideal Gases 319
Contents vii
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11 Intermolecular Forces
and the Liquid State 325 12 The Solid State
12.1 Introduction to Solids
357
358
11.1 Kinetic Molecular Theory, 12.1a Types of Solids 358
States of Matter, and Phase Changes 326 12.1b The Unit Cell 359
11.4 The Nature of Intermolecular Forces 343 12.5 Phase Diagrams 385
11.4a Dipole–Dipole Intermolecular Forces 343 12.5a Phase Changes Involving Solids 385
11.4b Dipole–Induced Dipole Forces 345 12.5b Phase Diagrams 386
11.4c Induced Dipole–Induced Dipole Forces 346
Unit Recap 392
11.5 Intermolecular Forces and the Properties
of Liquids 347
11.5a Effect of Polarizability on Physical Properties 347
11.5b Effect of Hydrogen Bonding on Physical Properties 348
11.5c Quantitative Comparison of Intermolecular Forces 350
Contents viii
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13 Chemical Mixtures:
Solutions and Other Mixtures 397 14 Chemical Kinetics
14.1 Introduction to Kinetics
435
436
13.1 Quantitative Expressions 14.1a Factors that Influence Reactivity 436
of Concentration 398 14.1b Collision Theory 437
13.3 External Control of Solubility 412 14.4 Concentration Change over Time 448
13.3a Pressure Effects: Solubility of Gases in Liquids 412 14.4a Integrated Rate Laws 448
13.3b Effect of Temperature on Solubility 414 14.4b Graphical Determination of Reaction Order 452
14.4c Reaction Half-Life 455
13.4 Colligative Properties 416 14.4d Radioactive Decay 457
13.4a Osmotic Pressure 416
13.4b Vapor Pressure Lowering 421 14.5 Activation Energy and Temperature 458
13.4c Boiling Point Elevation 423 14.5a Reaction Coordinate Diagrams 458
13.4d Freezing Point Depression 425 14.5b The Arrhenius Equation 463
14.5c Graphical Determination of Ea 465
13.5 Other Types of Mixtures 427
13.5a Alloys 427
14.6 Reaction Mechanisms and Catalysis 466
13.5b Colloids 428 14.6a The Components of a Reaction Mechanism 466
14.6b Multistep Mechanisms 469
Unit Recap 431 14.6c Reaction Mechanisms and the Rate Law 472
14.6d More Complex Mechanisms 474
14.6e Catalysis 477
Contents ix
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15 Chemical Equilibrium
15.1 The Nature of the Equilibrium State
483
484
16 Acids and Bases
16.1 Introduction to Acids and Bases
513
514
15.1a Principle of Microscopic Reversibility 484 16.1a Acid and Base Definitions 514
15.1b The Equilibrium State 485 16.1b Simple Brønsted–Lowry Acids and Bases 515
16.1c More Complex Acids 517
15.2 The Equilibrium Constant, K 487
16.2 Water and the pH Scale 518
15.2a Equilibrium Constants 487
15.2b Writing Equilibrium Constant Expressions 489 16.2a Autoionization 518
15.2c Manipulating Equilibrium Constant Expressions 492 16.2b pH and pOH Calculations 522
15.3 Using Equilibrium Constants 16.3 Acid and Base Strength 524
in Calculations 495 16.3a Acid and Base Hydrolysis Equilibria, Ka, and Kb 524
15.3a Determining an Equilibrium Constant Using 16.3b Ka and Kb Values and the Relationship
Experimental Data 495 Between Ka and Kb 527
15.3b Determining Whether a System Is at Equilibrium 497 16.3c Determining Ka and Kb Values in the Laboratory 531
15.3c Calculating Equilibrium Concentrations 499
16.4 Estimating the pH of Acid
15.4 Disturbing a Chemical Equilibrium: and Base Solutions 532
Le Chatelier’s Principle 501 16.4a Strong Acid and Strong Base Solutions 532
15.4a Addition or Removal of a Reactant or Product 501 16.4b Solutions Containing Weak Acids 533
15.4b Change in the Volume of the System 504 16.4c Solutions Containing Weak Bases 538
15.4c Change in Temperature 506
16.5 Acid–Base Properties of Salts 542
Unit Recap 509 16.5a Acid–Base Properties of Salts: Hydrolysis 542
16.5b Determining pH of a Salt Solution 544
Contents x
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17 Advanced Acid–Base Equilibria
17.1 Acid–Base Reactions
553
554
18 Precipitation and Lewis Acid–Base
Equilibria 593
17.1a Strong Acid/Strong Base Reactions 554 18.1 Solubility Equilibria and Ksp 594
17.1b Strong Acid/Weak Base and Strong Base/Weak
18.1a Solubility Units 594
Acid Reactions 555
18.1b The Solubility Product Constant 595
17.1c Weak Acid/Weak Base Reactions 557
18.1c Determining Ksp Values 596
Contents xi
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19 Thermodynamics:
Entropy and Free Energy 617 20 Electrochemistry
20.1 Oxidation–Reduction Reactions
and Electrochemical Cells
651
652
19.1 Entropy and the Three Laws
of Thermodynamics 618 20.1a Overview of Oxidation–Reduction Reactions 652
20.1b Balancing Redox Reactions: Half-Reactions 654
19.1a The First and Second Laws of Thermodynamics 618
20.1c Balancing Redox Reactions in Acidic
19.1b Entropy and the Second Law of Thermodynamics 619
and Basic Solutions 657
19.1c Entropy and Microstates 620
20.1d Construction and Components of Electrochemical
19.1d Trends in Entropy 622
Cells 660
19.1e Spontaneous Processes 624
20.1e Electrochemical Cell Notation 663
19.1f The Third Law of Thermodynamics
and Standard Entropies 626
20.2 Cell Potentials, Free Energy,
19.2 Calculating Entropy Change 628 and Equilibria 664
19.2a Standard Entropy Change for a Phase Change 628 20.2a Cell Potentials and Standard Reduction Potentials 664
19.2b Standard Entropy Change for a Chemical Reaction 630 20.2b Cell Potential and Free Energy 671
19.2c Entropy Change in the Surroundings 631 20.2c Cell Potential and the Equilibrium Constant 672
20.2d Cell Potentials Under Nonstandard Conditions 674
20.2e Concentration Cells 677
19.3 Gibbs Free Energy 633
19.3a Gibbs Free Energy and Spontaneity 633 20.3 Electrolysis 678
19.3b Standard Gibbs Free Energy 635
19.3c Free Energy, Standard Free Energy, 20.3a Electrolytic Cells and Coulometry 678
and the Reaction Quotient 637 20.3b Electrolysis of Molten Salts 681
19.3d Standard Free Energy and the Equilibrium Constant 639 20.3c Electrolysis of Aqueous Solutions 684
19.3e Gibbs Free Energy and Temperature 642
20.4 Applications of Electrochemistry:
Unit Recap 646 Batteries and Corrosion 686
20.4a Primary Batteries 686
20.4b Secondary Batteries 687
20.4c Fuel Cells 689
20.4d Corrosion 690
Contents xii
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21 Organic Chemistry
21.1 Hydrocarbons
695
696
22 Applying Chemical Principles
to the Main-Group Elements 735
21.1a Classes of Hydrocarbons 696 22.1 Structures of the Elements 736
21.1b Alkanes and Cycloalkanes 698
22.1a The Periodic Table 736
21.1c Unsaturated Hydrocarbons 701
22.1b Metals 737
21.1d Hydrocarbon Reactivity 705
22.1c Nonmetals 739
Contents xiii
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23 The Transition Metals
23.1 Properties of the Transition Metals
759
760
24 Nuclear Chemistry
24.1 Nuclear Reactions
789
790
23.1a General Characteristics of Transition Metals 760 24.1a Nuclear vs. Chemical Reactions 790
23.1b Atomic Size and Electronegativity 760 24.1b Natural Radioactive Decay 791
23.1c Ionization Energy and Oxidation States 762 24.1c Radioactive Decay and Balancing Nuclear Reactions 792
23.2 Isolation from Metal Ores 764 24.2 Nuclear Stability 796
23.2a Common Ores 764 24.2a Band of Stability 796
23.2b Extraction of Metals from Ores 764 24.2b Binding Energy 799
24.2c Relative Binding Energy 801
23.3 Coordination Compounds:
Structure and Isomerism 767 24.3 Kinetics of Radioactive Decay 802
Contents xiv
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Acknowledgments
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versions of the OWLBook in their courses, most especially Professors Maurice Orna Kutai, Montgomery College—Rockville Campus
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Acknowledgments xv
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Anita Gnezda, Ball State University Eric R. Johnson, Ball State University
Nathaniel Grove, University of North Carolina at Wilmington Thomas Jose, Blinn College
Bernadette Harkness, Delta College Kirk Kawagoe, Fresno City College
Hongqiu Zhao, Indiana University—Purdue University at Indianapolis Resa Kelly, San Jose State University
Edith Kippenhan, University of Toledo Jeffrey A. Mack, Sacramento State University
Joseph d. Kittle, Jr., Ohio University Larry Margerum, University of San Francisco
Amy Lindsay, University of New Hampshire Diana Mason, University of North Texas
Krista Noren-Santmyer, Hillsborough Community College Donald R. Neu, St. Cloud University
Olujide T. Akinbo, Butler University Al Nichols, Jacksonville State University
James Reeves, University of North Carolina at Wilmington Olujide T. Akinbo, Butler University
James Rudd, California State University, Los Angeles John Pollard, University of Arizona
Raymond Sadeghi, University of Texas at San Antonio James Reeves, University of North Carolina at Wilmington
Mark Schraf, West Virginia University Mark Schraf, West Virginia University
Sherril Soman, Grand Valley State University Shawn Sendlinger, North Carolina Central University
Matthew W. Stoltzfus, Ohio State University Duane Swank, Pacific Lutheran University
Dan Thomas, University of Guelph Michael Topp, University of Pennsylvania
Xin Wen, California State University, Los Angeles Ray Trautman, San Francisco State
Kurt Winkelmann, Florida Institute of Technology John B. Vincent, University of Alabama
James Zubricky, University of Toledo Keith Walters, Northern Kentucky University
David Wright, Vanderbilt University
Reviewers James Zubricky, University of Toledo
Chris Bahn, Montana State University
Yiyan Bai, Houston Community College
Acknowledgments xvi
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About the Authors
institution and arrived at SUNY Oneonta, where he now works with under-
graduates, Cow Town Productions, and the UMass OWL team.
Susan M. Young
Hartwick College
Susan Young received her B.S. in Chemistry in 1988 from the University
of Dayton and her Ph.D. in Inorganic Chemistry in 1994 from the
University of Colorado at Boulder under the direction of Dr. Arlan
Norman, where she worked on the reactivity of cavity-containing phosp-
hazanes. She did postdoctoral work with Dr. John Kotz at the State
University of New York at Oneonta, teaching and working on projects in
Peter W. Samal
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of organisms in the solution. Thus a comparative study of the period
of incubation and the progress of nitrification in solutions seeded
with soils taken at different depths or at different places, becomes a
fair index of the number and vitality of the nitrifying organisms
contained therein.
427. Depth to Which Micro-Organisms are Found.—Koch
states that at the depth of about one meter, the soil is nearly free
from every kind of bacteria.[281] These observations have been
corroborated by Pumpelly and Smyth who find that no infection of a
bacterial nature is produced in a sterilized solution from samples of
clay taken at the depth of nine feet below the surface.[282]
It is evident from the nature of the experiments above described
that the nitrifying processes go on almost exclusively in those
portions of the soil which are subject to cultivation, while in the
subsoil and below the processes of nitrification are either retarded or
arrested. Any stores of nitrogenous matter, therefore, in an insoluble
state, resting in the subsoil, are preserved from oxidation and
consequent waste until such time as they may be removed to near the
surface.
428. Isolation of the Nitrous and Nitric Organisms in the
Soil.—The action of the organisms which produce nitrification either
in form of nitrites or nitrates, having been thoroughly established,
and the method of testing the soil therefor given, it remains to
describe a method by means of which these organisms in the soil
may be isolated and obtained in a state of purity. The difficulties
attending this process are extremely great on account of the
similarity of the two organisms. All earlier attempts to make pure
cultures of the two separate organisms were attended with but little
success.
According to Winogradsky the method of culture on gelatin so long
practiced is not to be relied upon.[283] It is very difficult to eliminate
by this process the organisms which grow rapidly in gelatin and
which mature their colonies in two or three days, but where they
require eight or ten days to produce a colony the method is
successful. In fact, by the gelatin process as it was at first practiced, a
good deal was owing to chance, but sometimes by a happy accident a
pure nitro-bacterium might be isolated.
Formerly it was considered that a liquid could be regarded as
sterile if it gave no growth upon gelatin. It has, however, now been
demonstrated that a liquid may contain large numbers of nitro-
bacteria and still produce no growth upon gelatin. However, for the
organisms which accompany the nitro-bacteria in soils, it is regarded
as certain that if no growth on gelatin is produced by them they are
absent. Therefore in the case of a solution which has been seeded
with a soil, if it can be brought to such a state as to produce no
growth on gelatin, it may be safely assumed that it contains no
bacterial organisms save those which are capable of producing
nitrites or nitrates. Therefore if such a solution produce nitrification
and at the same time no growth upon gelatin, it may be considered as
a proof of the isolation of the nitro-organisms from all others.
This method was also worked out independently by Mr. and Mrs.
Frankland.[284]
Winogradsky says further he confesses that he has advanced these
views only provisionally and without being convinced of their
infallibility. Strictly speaking, the proof of seeding gelatin is not
sufficient alone because the absence of growth can not be regarded as
the exclusive privilege of the nitro-bacteria. Such might be the case
sometimes for an accidental mixture of microbes, introduced with
any given sample of soil into the cultures, but the criterion is not
absolute. Microbes, for example, of a sulfurous or ferruginous nature
may be cited, for which the gelatin layer is not only unfavorable but
even fatal. It may thus happen that there may be eliminated from the
solution all that will grow upon gelatin without freeing it from some
special kinds of cultures, refractory like the nitro-bacteria, but which
might reappear if they should be resown in some favorable nutritive
solution. On account of this fault in the process, Winogradsky has
been impressed with the necessity of bringing out a better method.
In using the gelatin media it is necessary to find the one that is
suited to nourish these organisms, which would evidently be the way
promising the greatest success. This having been found, and those
organisms which produce colonies being easily recognizable, a great
step towards the solution of the problem will have been made and
the more so as the medium would be at the same time absolutely
unfavorable to other forms of microbes. On account of the slow
degree of development of the nitro-organisms, all others would
probably have opportunity to grow and strengthen to their exclusion,
unless these interfering organisms could be completely removed.
429. The Culture Solution.—The culture-solution, first
proposed by Winogradsky, had the following composition:
To ten grams of gelatin or one part of agar-agar in 100 cubic
centimeters of water add potassium phosphate, one-tenth of a gram;
magnesium sulfate, five-hundredths of a gram; calcium chlorid,
trace; and sodium carbonate, half a gram. The solution being
sterilized in the usual way by heating, there are added to it a few
cubic centimeters of a sterilized solution containing two-tenths per
cent of ammonium sulfate. Such a solution has been proved to be
very favorable to nitro-organisms. Nevertheless the experiments with
such solutions gave no definite results and they were abandoned.
The non-success of this method led Winogradsky to adopt a
nitrifying solution which absolutely excluded all organic substances.
Instead of using an animal or vegetable gelatinous substance he used
one of a mineral nature, first proposed by Graham and Kühne.[285]
Two of these gelatinous mineral substances were considered; viz.,
the aluminum hydroxid and the hydrate of silica. The latter was
chosen.
430. Preparation of the Mineral Gelatinous Solution.—
The soluble glass which is found in commerce is generally of a thick,
sirupy consistence. It is first diluted with three times its volume of
water. One hundred cubic centimeters of this liquid are poured with
constant stirring into fifty cubic centimeters of dilute hydrochloric
acid and the mixture placed in a dialyzer. It is useless to employ a
standard solution of silica. All that is necessary is to submit to
dialysis a liquid with an excess of acid and sufficiently dilute not to
be exposed to the danger of being spontaneously gelatinized in the
dialyzer. The dialyzer is left for one day in running water and two
days in distilled water, often renewed. The solution is then ready for
use. This is the case when it is no longer rendered turbid on the
addition of silver nitrate, showing that the hydrochloric acid has
been entirely extracted. The solution is then to be sterilized by
boiling, and preserved in a glass flask closed with a plug of cotton.
More recent instructions by Winogradsky for preparing the
gelatinous silica recommend dialyzing the soluble glass after
treatment with hydrochloric acid in a parchment tube.[286] The
proportions of silicate and acid are 100 cubic centimeters of the
silicate solution (1.06 specific gravity) and 100 cubic centimeters of
hydrochloric acid (1.1 specific gravity). With a dialyzing tube placed
two days in running water and one day in distilled water frequently
changed it will be found that the acid is completely removed. One
hundred cubic centimeters of the residual liquor giving no reaction
for hydrochloric acid are concentrated to twenty cubic centimeters.
When cold there is added one cubic centimeter each of a solution of
ammonium sulfate and of sodium carbonate, together with
corresponding quantities of the other nutrient salts commonly
employed. The ammonium sulfate should never exceed two to two
and a half, and the sodium carbonate four parts per thousand. To the
flask containing the above substances is added one drop of the seed-
liquor, which may be a soil water or a drop from some previous
culture. The flask is shaken and the mixture poured into a low
circular glass dish which is covered by one slightly larger in diameter
(Petri double dish). To the liquid in the dish is added a drop of a cold
saturated solution of common salt, and it is then stirred with a
platinum spatula. The addition of the salt greatly favors the setting of
the jelly. The jelly may set in from two to three hours, but a longer
time secures better results in the end.
In employing these preparations as seed, after the organisms have
grown, it is absolutely necessary to use the isolated cellules and not
the aggregated masses (zoöglœæ). The latter are rarely free of foreign
germs which adhere to their gelatinous envelope. Since the zoöglœæ
can not be broken up by any artificial means it is necessary to await
their spontaneous disintegration in order to separate the mobile
monads. The opalescence of the culture-liquid is a sure index of this
separation.
The particles of mineral gelatin to be used as seed for nitrifying are
best taken as follows:
A glass tube is drawn out immediately preceding the operation,
until the end is as fine as a hair. The surface of the mineral gelatin is
magnified by means of a dissecting microscope magnifying 80 to
100, to the proper degree and the preparation table is so arranged as
to give a perfect support to the right hand which should hold the
filament of glass. The smallest colony is then pricked with the needle
and the end of the glass is broken and dropped into the flask which is
to be seeded. The seed is thus selected in as small a particle as may
be desired, only a few cells, but it can always be ascertained with
certainty that some of the particles have been obtained by this
operation.
The method of cultivation on mineral jelly is considered by
Winogradsky an important resource in the study of the nitrifying
organisms. It removes the chief difficulties heretofore existing in
discovering and characterizing these organisms among the
innumerable micro-organisms of the soil. The long series of cultures
necessary to separate the organisms are rendered nugatory. By
directly introducing a little of the earth into the silicic jelly the active
organisms in nitrification can be at once discovered. It is preferable,
however, as indicated below, to previously produce a nitrification in
an aqueous solution by a trace of earth and to take from it the seed
for impregnating the solid medium. In order to show at once a proof
of its nitrifying character, it is only necessary to take a small bit of
the mineral jelly, the size of a grain of rye, and to throw it into a little
sulfuric acid which has been treated with diphenylamin. There is at
once formed a blue spot equal in intensity to a saturated solution of
anilin blue.
In regard to the growths which nitro-organisms make in a medium
of the kind described, they are far from being so marked as are those
produced by ordinary micro-organisms.
A nitro-bacterium is not capable of the energy of growth which is
recognized for the greater number of microbes. The colonies
contained in the gelatin always remain small. The largest among
them are just visible to the naked eye like white points. Along the
striae, on the contrary, there is formed quite a thick white crust. To
the naked eye, in general, there is nothing very characteristic in the
formation of colonies in a medium of this nature. But this impression
changes altogether when the placques are examined with a low
magnifying power. The colonies, especially those of the interior
surface, reveal then an aspect so curious as to be well remembered
when once seen.
This mineral gelatin, as has already been noticed, is very
unfavorable to the growth of microbes other than nitro-bacteria and
becomes altered only under the action of the air. If the placques be
carefully preserved from desiccation the culture of these organisms
can be continued for several weeks. Although they do not seem to
increase, the colonies, as well as the jelly, are still in a good condition
at the end of that time. Nevertheless the expectation that this
medium would prevent the formation of any foreign organism has
not been realized. Some of the organisms which accompany the
nitro-bacteria in soil, also grow upon the silicic jelly; but they do not
form colonies, properly so-called, and their growth is extremely slow.
They generally make their appearance before the nitro-bacteria and
spread exclusively upon the surface in form of white spots, so
transparent that without careful examination they would not be
discovered. Having reached a certain size the spots do not change
during entire weeks. This circumstance renders the operations of
isolation somewhat delicate, but does not prevent them.
431. Preparation and Treatment of the Solution to be
Nitrified.—The organisms having been grown on the siliceous
gelatin in the manner described they are tested for their nitrifying
power as follows:
The mineral solution which is to be nitrified with the above
preparation is composed of ammonium sulfate, four-tenths gram;
magnesium sulfate, half a gram; potassium phosphate, one-tenth
gram; calcium chlorid, trace; sodium carbonate, six-tenths to nine-
tenths gram; and distilled water, 100 cubic centimeters. The sulfates
with the calcium chlorid on the one hand, and the phosphate and
carbonate on the other, are dissolved separately and the two
solutions sterilized separately and mixed after cooling. The seeding is
then done as described above.
432. Isolation of the Nitrous and Nitric Organisms.—
Instead of proceeding immediately to the isolation of special
organisms in the soil, the preliminary period of purification is
prolonged by Winogradsky by allowing the free growth to take place
of all the organisms which can be maintained in the ordinary
medium.[287]
The composition of the culture solution employed is as follows:
Distilled water, 1,000 parts; potassium phosphate, one part;
magnesium sulfate, half a part; calcium chlorid, trace. Each flask
receives besides this some magnesium carbonate, freshly washed
with boiling water and added in slight excess.
The flasks thus charged are sterilized, and after sterilization there
are added two cubic centimeters of a solution of two per cent of
ammonium sulfate, which, when added to fifteen or twenty cubic
centimeters of liquid give from two to two and a half parts per
thousand.
They are then seeded with soil. The reasons for this preliminary
treatment are as follows: First, all the observations upon the
enfeeblement of the oxidizing power of these organisms have been
made upon cultures seeded simply by the fresh soil, and in cultures
derived therefrom. In the second place, the existence of the two
forms, one nitrous and the other nitric, prevents at once the isolation
of a single organism.
Samples of soil from Europe, Africa, Asia, Australia, and America,
were used for seed for the experiments. First, the cultures were made
by seeding with a small quantity of each of these samples of soil, and
each one of these cultures served as a point of departure for a series
of subcultures. The temperature of the cultures should be kept
constantly at 30°.
The method of following the nitrification adopted by Winogradsky
is essentially that of Warington, the percentage of ammonia
remaining at any time being determined by nesslerizing. To detect
the presence of nitric acid the nitrous acid is decomposed by boiling
with ammonium chlorid in excess, or with urea, and then
diphenylamin is used as a reagent. By treatment with ammonium
chlorid and boiling, the ammonium nitrite is resolved into free
nitrogen and water as indicated by the equation NH₄NO₂ = N₂ +
2H₂O. Or the total oxidized nitrogen may be estimated by the
Schloesing method or by any of the standard methods hereafter
given. The nitrous acid is then determined by potassium
permanganate and the nitric acid by difference.
A great difference is to be noted between freshly taken earth and
that which has been kept for a long while, especially when sealed.
With fresh earth taken near the surface a mere trace is sufficient to
produce nitrification. With samples of earth which have been kept
for a long while and thoroughly dried, several grams must be added
in order to secure perfect nitrification. The period of incubation with
the samples of earth ranges from three to twenty days. The beginning
of the phenomenon is revealed by the appearance of nitrous acid, of
which the quantity is increased very rapidly, but in the end it
disappears and is transformed into nitric acid.
433. Statement of the Results.—The method of stating the
results of examination of soils for nitrifying organisms is illustrated
by the following example:
Soil from Zurich. The culture was seeded on the 11th of October,
one gram of soil being taken. On the 20th of October the nitrous acid
had reached its maximum of intensity and there was no ammonia
left. On the 29th of October the nitrous acid remained almost
stationary and there was hardly any nitric acid present. On the 1st of
November the reaction for nitrous acid began to decrease. On the 5th
of November the reaction for nitric acid was very intense. On the 11th
of November the nitrous acid had all disappeared except a mere
trace.
The above order of phenomena was observed with all the samples
of soil tried, from which it is concluded with certainty that nitrifying
organisms transplanted directly from their natural medium in the
soil into a liquid easily nitrifiable produce at once nitrous acid in
abundance. The phenomenon of nitrification is divided into two
periods therefore, of which the first is devoted to the production of
nitrites, and the second consists in the oxidation of the nitrites, and
this does not commence until the total disappearance of the
ammonia. Occasionally the formation and oxidation of the nitrites
practically go on together, but never equally, the oxidation of the
nitrites being always sensibly behind their formation.
434. Method for Subcultures.—From the mother cultures
described above, Winogradsky makes subcultures as follows:
The solution to be nitrified is prepared as in the mother cultures.
The seeding is accomplished by adding a small quantity of the liquor
of the mother culture after shaking. Subcultures can be made in this
way to the seventh generation.
In respect of the oxidation of the nitrites the results may be
entered as negative if they have not disappeared at the end of two
months.
To determine whether the process of oxidizing the nitrites is in
progress or not the total nitrous acid is estimated, and the process
repeated at the end of eight or ten days. Should there be no
diminution of the nitrous acid within this time it may be considered
that the further oxidizing action is not taking place.
435. Use of a Solid Medium.—It may be justly claimed that the
action of nitrifying organisms in a liquid is not to be compared with
their action in a solid medium, such as a soil which is their natural
habitat. It might be, therefore, that the inability of the nitrous
organism to produce nitrates is due to the nature of the medium in
which it is cultivated. Winogradsky in order to determine this
question cultivated the organism in a solid medium of two kinds,
first a silicate gelatin impregnated with an ammonium salt and
second in sterilized earth. The silicate jelly is prepared as follows:
Mix a jelly of silica containing some ammonium sulfate with
sterilized soil. The seeding is done with one of the subcultures which
no longer has the power of producing nitrates.
In the case of the jelly the seeding is accomplished as follows:
A minute drop of a culture liquid is taken with a capillary glass
tube and applied in striae to different parts of the solid jelly; or a
minute drop of the culture liquid may be mixed with the jelly before
solidification. The Petri dishes in which these cultures are made can
be preserved in a moist atmosphere and thus the desiccation be
easily prevented for a long time. From time to time small pieces of
the jelly as large as a pea can be taken and tested for the progress of
nitrification.
Results.—The nitrous reaction, both in the prepared jelly and in
sterilized soil, will appear in a few days. At the end of from seven to
twelve days it will have attained its maximum intensity and will then
remain stationary indefinitely. Sterilized soil has no power to
generate the nitric from the nitrous ferment. The two organisms are,
therefore, of different species.
After a few generations the power of producing nitrates seems to
be lost although the nitrous ferment may still be active. This
suppression of the power to oxidize the nitrites is not due to any
pernicious influence of the culture-medium but to the condition of
the successive solutions at the time of taking the seeding samples.
436. Microscopic Examination.—A small particle of the
deposit in the culture-liquid is spread on a glass slide and dried.
There is then added a drop of very dilute perfectly transparent
malachite green solution. Malachite green is Bittermandelölgrün, or
tetramethyldiamidotriphenylcarbinol. Use the zinc chlorid double
salt or oxalate. In about half a minute it is washed and colored by a
very dilute solution of gentian violet which is left to act for some
time. The cells then appear distinctly colored on a colorless
background.
In examining in this way nitrous cultures under a moderate
enlargement there are seen particles of material covered with
scattered groups and massive zoöglœæ composed of cells which are,
doubtless, identical.
By their round or roundish forms, by their relative size and
especially by their numbers and uniformity they are at once
distinguished from the other vegetations which are generally of a
purely bacillus shape.
With the exception of some shreds of mycelium coming from some
oidium in the soil the microscope reveals nothing but the organisms
described. The microscopic appearance[288] of the nitrous ferment is
shown in Fig. 69.
Figure 69. (Upper figure.) Nitrous ferment prepared by
Winogradsky from soil from Cito.