Improving Accuracy For Finite Element
Improving Accuracy For Finite Element
Improving Accuracy For Finite Element
Abstract
OPEN ACCESS
omitted (coil was simply released perpendicularly at the IA neck). We suspect these simplify-
ing assumptions will ultimately hamper the goal of accurate patient-specific virtual interven-
tion, which requires realistic simulations to recapitulate patient-specific coiling cases.
The objective of the current study is to improve the modeling assumptions in our FEM coil-
ing technique. For a realistic coil pre-shape, we account for the coil manufacturing process by
“virtually manufacturing” the coil–modeling a mandrel and winding the coil around it to
obtain a pre-shape. For realistic mechanical properties of coils with different stiffness, we
adopt mechanical rigidity of spring-like structures, following an approach by Otani et al. [5].
Both of these improved assumptions allow the physical properties of a wide array of coils to be
modeled. Moreover, we explicitly simulate advancing the coil through the parent artery.
Here, we describe these key strategies for improving the FEM coiling technique and present
the overall virtual coiling workflow. Furthermore, to test whether implementing these strate-
gies result in improved accuracy of coil deployments, we compare simulations of coil deploy-
ment using our previously-developed technique and our new technique against in vitro
experimental results.
Methods
The institutional review board at University at Buffalo approved this study (study no. 030–
510704). Patient consent was waived and all data and images were collected retrospectively
and de-identified. All methods were conducted in accordance with the approved protocol.
Fig 1. The physical properties of coils and how they were modeled. Top Row: The coil’s primary stock wire is composed of platinum and was not modeled in
either technique. 2nd Row: The coil’s secondary structure comprises the stock wire wound to form a helical spring-like structure. The secondary structure was
modeled as a series of beam elements in both techniques, with the Improved Technique using hollow elements and the Original using solid elements. 3rd Row:
The coils tertiary “pre-shape” is created when the spring-like structure is wound around a mandrel and heat-treated to create a 3D shape with “shape-memory”.
The Original Technique modeled the pre-shape as mathematical curves generated from parametric equations, while the Improved Technique modeled the pre-
shape by virtually winding the coil’s secondary structure around a mandrel. Bottom Row: We modeled coil mechanical properties after springs, with the
Original Technique assuming beam elements had the elastic moduli of a platinum wire and the Improved Technique calculating beam properties by equating
beam rigidity to spring rigidity.
https://doi.org/10.1371/journal.pone.0226421.g001
that the rigidity of the beam is equivalent to that of the helical spring-like coil [5, 11]. While
this approach already appears in the literature, it represents an important modification from
our Original Technique [3], in terms of model fidelity and computational efficiency. The
mechanical rigidities of a helical spring–namely compressive (Dcompressive), shearing (Dshearing),
and flexural (Dflexural)–are determined by its geometry and the material properties of its pri-
mary wire [11]:
Gw D41 l
Dcompressive ¼ ð1Þ
8nD32
Ew D41 l
Dshearing ¼ ð2Þ
8nD32
Ew Gw D41 l
Dflexural ¼ ð3Þ
16nD2 ð2Gw þ Ew Þ
The appropriate elastic moduli for the coil’s beam elements are calculated by equating beam
rigidity to spring rigidity:
Eb Ab ¼ Dcompressive ð4Þ
Eb Ib ¼ Dflexural ð6Þ
Here, Ab is the beam’s cross-section area, Ib is its area moment, and λ is a shape correction fac-
tor, which is approximately 0.5 for a tubular beam [12]. Assuming that the coil’s primary wire
loops are tightly wound, we approximate the length of the coil (l) to be nD1.
Modeling strategies for the mechanical steps of coiling. In terms of the mechanics of
coil deployment, 3 steps play key roles in determining the final configuration of a deployed
coil: coil packaging into the catheter, coil advancement through the parent artery in the coil-
loaded catheter, and coil deployment into the IA. Done by the manufacturer, coil packaging is a
critical mechanical step that determines the coil’s behavior when released from the catheter
during coil deployment because packaging causes the coil to store strain energy that drives it to
recover its pre-shape.
In our Original Technique, coil packaging and coil deployment are modeled, but not coil
advancement. To bypass coil advancement, we isolate the IA sac from its parent artery, and
directly place the tip of a straight catheter perpendicular to the IA neck. Once packaged into
the straight catheter, the coil is directly deployed into the IA. By isolating the IA sac and not
modeling the coil advancement step, we believe the simulation does not provide a sufficiently
accurate representation of the coil just prior to deployment, i.e. it does not capture the compo-
nent of strain energy in the coil induced by its bending along the tortuous parent artery.
To capture this strain energy component, in the Improved Technique we explicitly simulate
coil advancement in addition to coil packaging and deployment. Instead of modeling advance-
ment of the coil-loaded catheter, we model a curved catheter that is placed directly along the
anatomic centerline of the parent artery of the IA. This curved catheter serves as the “path” the
coil takes during advancement: after coil packaging, the coil is pushed through the curved
catheter to advance it to the IA. Placing the catheter along the anatomic centerline of the par-
ent artery is an approximation. In reality, the catheter will not exactly follow the artery center-
line, but instead will minimize its bending energy.
Fig 2. Workflow for virtual coil deployment using FEM. The workflow consists of (A) pre-processing, and (B) FEM simulation. The major improvements
(underlined) are in step 3, Coil Model Creation (pre-shape and mechanical properties), and in step 5, Coil Advancement (previously not modeled but now added to
capture coil mechanics in tortuous vessels).
https://doi.org/10.1371/journal.pone.0226421.g002
the longest coil being deployed. Next, to model the catheter, we sweep the centerline with a
cylindrical surface in Creo (ver.4., PTC, Boston, MA) and convert the surface to a STL
model. The cylindrical radius of the swept catheter is set to be twice the radius of the coil.
Finally, the catheter surface is extended perpendicular to and away from the artery inlet
upstream of the IA, with a distance equal to the length of the coil.
3. Coil Model Creation–The Improved Technique requires a coil model as input, as illustrated
in Fig 2A. The strategies for modeling coils were described before.
FEM simulation of coiling. We model coil packaging into the catheter, coil advancement to
the IA, and coil deployment into the IA, as illustrated in Fig 2B. All simulations are implemented
in Abaqus (ver.2016, SIMULIA, Providence, RI). To pull (during packaging) or push (during coil
advancement and deployment) the coil in the simulations, we specified displacement boundary
conditions on the distal or proximal end of the coil. These boundary conditions were applied
using the “smooth step” amplitude specification in Abaqus [14]. This amplitude function ramps
up the applied displacement at the beginning of the simulation step and then ramps it down at the
end of the step. Specific details of the 3 mechanical steps are described below:
4. Coil Packaging–To simulate coil packaging, we first align one end of the coil with the
proximal tip of the catheter, and then continuously pull the coil into the catheter by speci-
fying a displacement until it is fully inside. The total amplitude of the displacement is
equal to the length of the coil.
5. Coil Advancement–After packaging, the coil is pushed along the stationary catheter
(along the tortuous parent artery) to advance it to the IA. To do this, a displacement is
applied to the proximal end of the packaged coil, with an amplitude equal to the arc-
length of the centerline of the catheter.
6. Coil Deployment–Once advanced to the IA through the stationary catheter, the coil is
pushed out of the catheter to deploy it into the IA sac by applying a displacement until it
is fully released from the catheter. To mimic clinical placement of a balloon or stent to
prevent coil herniation into the parent artery during coil deployment (especially in wide-
necked IAs) [15], an artificial STL surface is modeled across the IA orifice.
Since coiling is mechanically dynamic with many contact interactions (e.g. coil-to-IA con-
tact), we use the explicit dynamics solver in Abaqus for all simulations (Abauqs/Explicit). This
Abaqus/Explicit solver uses a lumped mass matrix approximation, along with a central differ-
ence rule for time integration [14]. The time step is adjusted automatically throughout the sim-
ulation to maintain numerical stability, based upon estimates of the highest frequency of each
individual beam element in the model. The estimate of the stable time increment also depends
on material damping, which here was taken in the form of Rayleigh damping with both mass
(α) and stiffness (β) proportional contributions. These 2 damping coefficients are determined
empirically for each model. To model contact, we use the “general contact” algorithm with the
“penalty” method for tangential contact behavior and “hard” contact pressure-overclosure for
normal contact behavior. All contact interactions are modeled including coil-to-coil, coil-to-
catheter, and coil-to-IA and for each interaction, a specific friction coefficient is specified.
During simulations, the catheter and IA are kept rigid. To model deployment of multiple coils
into the same IA, the 3 mechanical steps are simulated sequentially for each coil. We assume
that the effect of gravity on the coil is negligible compared to the effect of other forces in the
model, such as the internal forces in the coil and those due to contact interactions, and thus do
not model it in the Improved Technique, nor did we model it in the Original Technique.
Fig 3. Flowchart of our experimental approach. From Left to Right, computer models of 2 IAs were used in this study as testbeds. Experiment: Based on the IA
models, 4 silicone phantoms (duplicates of each IA) were fabricated, coils were deployed into each phantom, and intra-aneurysmal cross-sections were extracted.
Simulation: The phantoms were imaged to create virtual models, and coil deployments were virtually recreated using the Original Technique and Improved Technique
(9 iterations for each phantom). Cross-sections were extracted matching those in the experiments. Coil Distribution Analysis: Physical and virtual coil distributions were
quantified by coil density (CD, space occupied by coil–in red in left image) and lacunarity (L, gaps between coils–red in right image) from cross-section images. To
compare the virtual techniques against experiments, Euclidean distances from the experimental coil distributions to the virtual coil distributions were calculated and
evaluated (Coil Distribution Analysis).
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Table 1. The type and size of coils deployed in each physical and virtual phantom.
Coil Size Coil Type
D3 (mm) x l (cm)
Phantom I1 (ICA) 5 x 10 Axium Prime 3D Bare Platinum Coils
Phantom I2 (ICA) 5 x 10
Phantom A1 (ACOM) 6 x 20; 5 x 10
Phantom A2 (ACOM) 6 x 20; 5 x 10
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the phantoms. The type and size of the coils deployed in each phantom is summarized in
Table 1. The primary wire and secondary structure diameters of all the physical coils were
D1 = 0.0381 mm and D2 = 0.2921 mm.
To preserve deployed coil configuration, the phantoms were drained of water and filled
with a low-viscosity epoxy resin (SPI Spurr Formula, West Chester, PA) [17]. Epoxy was
injected slowly into each phantom as to not disturb the coils. Once solidified, the phantoms
were removed from the silicone and cast into epoxy resin blocks (Fig 3). The epoxied phan-
toms were oriented in the blocks such that their necks and domes were parallel to one block
face and perpendicular to the 4 adjacent faces.
Because we could not obtain 3D coil configuration from clinical imaging, we obtained 2D
coil distributions on a sequence of intra-aneurysmal cross-sections by sectioning the epoxy
blocks. Each block was sanded in planar cross-sections, 1 mm apart using a belt sander. The
block surfaces were polished and imaged after each 1 mm interval. In total, 5 sequential cross-
sections were obtained from each phantom, beginning from the IA dome and progressing
towards the neck (Fig 3).
Modeling the physical coil deployments. We virtually recapitulated the physical coil
deployments in the 4 phantoms using both the Original and Improved Techniques (Fig 3). For
each phantom, we performed 18 simulations: 9 times using the Original Technique and 9
times using the Improved Technique. We did this to capture the natural variation in the
dynamic and random coil deployment process. To represent this variability, we changed the
initial conditions of deployment by rotating the coil in 40˚ increments (up to one full rotation
of 360˚) coaxially with respect to the catheter before each packaging simulation. This resulted
in a total of 72 unique virtual coil deployments (18 per phantom: 9 by the Original Technique
and 9 by the Improved Technique).
For all simulations using the Original Technique, we generated mathematical coil pre-
shapes having the same dimensions (D3×l) as the 2 different sized coils (Table 1). For the coil’s
mechanical properties, we assigned beam elements to have the same elastic moduli as platinum
(92%)/tungsten (8%) alloy, Eb = 230 GPa and Gb = 82 GPa [5, 9]. For all simulations using the
Improved Technique, we created coil pre-shapes of the 2 different coils by modeling 2 different
sized coil mandrels, using the same coil winding pattern for each coil. Note that because the
mandrel design and winding pattern for Axium coils are proprietary, we modeled a general-
ized mandrel design and winding pattern from a patent for coils by a different coil manufac-
turer because that patent explicitly describes and illustrates mandrel designs and winding
patterns [8]. In addition to “virtually manufacturing” the pre-shapes, we calculated the appro-
priate elastic moduli of the coil’s beam elements to be Eb = 1.52×10−3 GPa and Gb = 1.85×10−3
GPa from the aforementioned spring rigidity Eqs (1–6).
To demonstrate the capabilities of our Improved Technique at simulating coiling in ana-
tomical vascular geometries, we also performed an additional coiling simulation in the original
anatomical STL model (not the phantom model) of the ICA aneurysm, which contained its
tortuous parent artery. Using the Improved Technique, we simulated the complete
deployment procedure of a 5 mm x 20 cm coil into this IA. Note that we used a longer coil (20
mm length) for this simulation in the anatomical ICA than the one used in the experiments
(10 mm length) in order to demonstrate coil advancement through a long and tortuous parent
artery. For comparison, we also performed the same coil deployment using the Original Tech-
nique (also in the anatomical STL model, but with the anatomical IA sac isolated from the par-
ent artery).
All FEM simulations were performed on a desktop computer with 2 Intel Xeon processors
(CPU E5-2687W 0 @ 3.10GHz) and 128 GB RAM. Simulations were run in serial with no paral-
lel processing, and average simulation times in the 4 phantoms for each technique were
reported in hours. In simulations for both techniques, we specified coil-catheter contact interac-
tions as frictionless. Coil-to-coil contact was modeled with a 0.2 coefficient of friction to model
lubricated platinum-to-platinum contact [4]. We specified a 0.6 coefficient of friction for coil-
to-IA contact to model the platinum-to-silicone contact, based on experimental measurements
of the coefficient of friction of silicone vascular phantoms by Ohta et al. [18]. In this study, we
found α = 1 s−1 and β = 10−6 s to be appropriate for damping in all simulated coil deployments.
Virtual phantom cross-sectioning. From the simulation results, we extracted 2D cross-
sections in the virtual coiled phantoms to match those in the experiments. This was done by
aligning the virtual phantoms with cross-section images of the physical phantoms in Star-
CCM+ (Siemens, Melville, NY), using the outlines of the parent artery and IA sac as reference.
Three specific distances were calculated using Eq (7) and evaluated: dMin, the smallest of the
distances between the experiment point and any of the 9 virtual points (for each technique),
dMax, the largest of the distances between the experiment point and any of the 9 virtual points
(for each technique), and dAvg, the distance between the experiment point and the mean of the
9 virtual points (of each technique).
To compare simulation results across the 4 phantoms, we grouped the 4 dMin, the 4 dMax,
and the 4 dAvg of both techniques, and performed univariate tests in SPSS (ver.25, IBM,
Armonk, NY) to determine if d was significantly different between the techniques. To do so,
we first tested the groups of distances for normality by performing Shapiro-Wilk tests. Because
we found all groups to be normally distributed, we tested their equality of variances using
Levene’s tests, and performed Student’s t-tests with equal variances assumed where appropri-
ate. Euclidean distance (d) was reported as mean ± standard deviation and d was determined
to be significantly different between techniques if p < 0.05.
Results
Simulation of complete coil deployment procedure in an anatomical
vascular geometry
To test the capability of our Improved Technique at simulating the complete coil deployment
procedure in an anatomical vascular geometry, we simulated coiling in the original STL model
of the patient-specific ICA aneurysm. Snapshots of the simulation, shown in Fig 4, demon-
strate successful implementation of the advancement phase of the simulation whereby the coil
was able to navigate the tortuous parent artery. Compared to coil deployment by the Original
Technique, coil deployment by the Improved Technique better resembled the actual coil
deployment in the ICA.
Fig 4. The 3 mechanical steps of virtual coiling. (A) Coil Packaging: The coil, in its pre-shape configuration, was pulled
continuously into the proximal end of the catheter until it was straightened (red dot = distal tip of the coil). (B) Coil
Advancement: The coil was continuously pushed in the catheter (positioned at the parent artery centerline) until it
reached the IA. (C) Coil Deployment (Improved Technique): The beginning of coil deployment happens directly after
advancement (same geometry in the “box”). For both C and D, the coil was continuously pushed along the catheter into
the IA sac until it was completely deployed, ending the FEM simulation. The stable time increment was approximately
Δt = 3 μs throughout the simulation of the 3 mechanical steps. (D) Coil Deployment (Original Technique): Coil
deployment by the Original Technique occurs without advancement through the catheter, only occurring at the neck of
the IA. As shown in the DSA image, the Improved Technique better resembled coil deployment in the actual IA than the
Original Technique.
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discerned by visually examining the distances between the mean of either coiling technique
and the experimental data points: in the majority of cross-sections, the distances were smaller
for the Improved Technique.
Fig 5. Coil packaging and deployment in experiment and simulation. (A) Coil packaging is the dynamic process in
which the coil is pulled into the catheter from its pre-shape. Qualitatively, the packaging simulation by the Improved
Technique better resembles the experiment than the packaging by the Original Technique. However, it should be
noted that gravity was not considered in simulations. (B) An example of coil deployment is shown in physical and
virtual Phantoms I2. Catheter placement and coil advancement by the Improved Technique resembles the experiment
more than the Original Technique.
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Fig 6. Quantification of coil experimental and computational results on cross-sections in aneurysm Phantoms A1, A2, I1, and
I2. The binarized image of each experimental cross-section is shown in its corresponding graph. Graphs labeled P1-P5 show the raw
values for lacunarity (L—vertical axis) vs. coil density (CD—horizontal axis) measured on each phantom cross-section (1–5), whereby
experimental points are shown by a cross, and individual virtual coil deployments are represented by circles (Original) or triangles
(Improved). The mean of the virtual coiling results (9 realizations by each technique) are represented by hollow circles (Original) or
hollow triangles (Improved). Note that the upper bounds of the vertical and horizontal axes of each graph differ in order to fit the data
points tidily in each graph. We observed that in all cross-sections, the range of both virtual coiling techniques lies near the experiment
point. Furthermore, in the majority of cross-sections, the mean of the Improved Technique was closer to the experiment than the
mean of the Original Technique.
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Fig 7. Euclidian distances from experimental to computational results of both techniques in the standardized, aneurysm-
averaged CD-L plane. (A) Example of the 3 Euclidean distances evaluated for comparison of both FEM techniques in the 4
phantoms, namely dAvg, DMin, and dMax. Graph axes represent “standard deviations”, where the origin (0,0) is the mean of
standardized CD and L. (B) Bar graphs of the 3 standardized Euclidean distances calculated for both techniques in the 4 phantoms.
In all 4 phantoms, dAvg, dMin, and dMax were smaller for the Improved Technique than for the Original Technique. (C) Results of the
univariate tests to compare Euclidean distances between techniques across the 4 phantoms. The average dAvg, dMin, and dMax in the
Improved Technique had significantly smaller Euclidean distance than the average distance in the Original Technique (significance
indicated by asterisk and the p-values for each test are reported).
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Fig 7B shows bar graphs of the 3 evaluated Euclidean distances for the 2 virtual coiling tech-
niques in the 4 phantoms. It is clear that all 3 are consistently smaller in the Improved Tech-
nique than in the Original Technique in all 4 phantoms. In other words, regardless of what
distance is considered, the Improved Technique was closer to the physical coil deployments
than the Original Technique.
A bar graph of dMin, dMax, dAvg averaged across the 4 phantoms for both simulation tech-
niques is shown in Fig 7C. Average Euclidean distance was significantly smaller for the
Improved Technique than for the Original Technique (dMin: p = 0.014, dMax: p = 0.013, dAvg:
Fig 8. Average simulation times of the 9 virtual deployments by each FEM technique. In all 4 phantoms, the average simulation time of the Improved Technique was
smaller than for the average time of the Original Technique.
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p = 0.045). This result indicates that the Improved Technique simulated coil deployments that
were significantly closer to the physical deployments than deployments by the Original Tech-
nique in terms of CD and L.
In addition to simulating coil configurations closer to the physical deployments than the
Original Technique, the Improved Technique was also found to be more computationally effi-
cient than the Original Technique. Fig 8 shows a graph of the average simulation time of the 9
virtual deployments by each technique in the 4 phantoms. In all 4 phantoms, the average simu-
lation time was shorter for the Improved Technique than for the Original, with the largest dif-
ference in simulation times being in Phantoms A1 and A2.
Discussion
We implemented 3 advanced features in our FEM coiling technique: coil pre-shape created
from mandrels, coil mechanical stiffness properties based on springs, and coil advancement
through the parent artery. Experimental results show that these new modeling strategies pro-
duce coil deployments that are more realistic. Quantitatively, our data demonstrate that the
Improved Technique is more accurate and efficient than the Original Technique. This study
highlights the importance of including coil-specific physical properties and mechanical coiling
steps to accurately model coiling.
Experimental evaluation
Validating coiling simulations is challenging, primarily because current clinical imaging can-
not resolve the configuration of deployed coils, making true in vivo comparisons impossible.
In this study, we developed a novel in vitro approach that offers several advantages over previ-
ous published validation strategies. Specifically, prior efforts (including our own [3]) simulated
coil deployments in idealized or patient-specific IA models, and indirectly compared the simu-
lation results to histology of coiled rabbit aneurysms [3, 4, 23, 24]. However, such comparisons
are inherently limited, since only qualitative similarities between simulated coil configurations
and histological data can be drawn, and therefore only simple relationships can be gathered,
for example, the association between increasing packing density and more homogeneous coil
distribution [23].
(Fig 8). Thus, our FEM technique (and FEM techniques in general) are currently too ineffi-
cient for clinical implementation. Several other virtual coiling techniques have been developed
that are more efficient than FEM, but potentially less accurate. At the simplest level, the porous
media technique achieves efficiency by representing coils implicitly as a porous region in the
IA sac [27]. While efficient, this technique prohibits localized flow analysis around the coils,
and a previous study showed that it simulates inaccurate post-treatment hemodynamics [28].
A step above porous media in terms of complexity are techniques that explicitly model some
coil geometric properties (e.g. l and D2) and can simulate coil deployment in a matter of min-
utes [29–31]. For example, one technique developed by Morales et al., called dynamic path
planning, models coil deployment efficiently by using mathematical constraints instead of
mechanics [30]. While these techniques are potentially efficient enough for clinical workflows,
their accuracy at simulating realistic deployed coil configurations is questionable because they
do not account for the tertiary pre-shape or mechanics of coils. We showed in the current
study that it is important to incorporate the physical properties of coils and simulate their
mechanics to achieve more accurate coil deployments, so future “hybrid” techniques should
aim to incorporate these features while maintaining efficiency.
Limitations
Our study has several limitations. First, we did not consider the interaction of blood with coils
in our FEM-based coiling technique, nor did we replicate pulsatile flow conditions in our in
vitro coil deployments. However, in vivo, adverse events like coil compaction can occur when
coils cannot withstand the pulsatile forces of blood flow [32]. Thus, future studies should
include the interaction of coils with flow during their deployment to obtain more realistic coil
configurations. Second, we only considered coil deployments in 2 patient-specific IA geome-
tries, and characterized the deployments using only 2 metrics on a limited number of planar
cross-sections. Therefore, coil deployments in greater numbers of IA geometries with more
advanced techniques to extract and characterize deployments should be considered. Lastly, it
is not possible to discern the contribution of each of the 3 new modeling strategies to increas-
ing the accuracy of the FEM technique, since all 3 were employed simultaneously. Future
experimental investigations are needed to determine which properties/mechanics have the
most impact on the accuracy of virtual coiling simulations.
Conclusions
In this study, we enhanced the modeling strategies in our FEM coiling technique and experi-
mentally tested whether they resulted in more accurate coil deployments. The improved FEM
technique was more accurate and efficient than the original FEM technique. The results of this
study highlight the importance of incorporating coil-specific physical properties and mechan-
ics in FEM simulations of endovascular coiling of intracranial aneurysm for accuracy.
Acknowledgments
The authors thank Professor Ciprian Ionita for use and guidance of Solidworks software.
Author Contributions
Conceptualization: Robert J. Damiano, Hui Meng.
Data curation: Robert J. Damiano.
Formal analysis: Robert J. Damiano, Vincent M. Tutino, Saeb R. Lamooki, Hui Meng.
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