1
1
h i g h l i g h t s g r a p h i c a l a b s t r a c t
" FT-IR and FT-Raman spectra of A complete vibrational analysis of 5-ethyl-5-phenyl-1,3-diazinane-4,6-dione is performed by combining
5-ethyl-5-phenyl-1,3-diazinane the experimental and theoretical information using Pulay’s density functional theory (DFT) based on
-4,6-dione in the solid phase were scaled quantum chemical approach. The calculated HOMO and LUMO energies show that charge transfer
recorded and analyzed. occur within the molecule. Comparison of simulated spectra with the experimental spectra provides
" The optimized geometry and important information about the ability of the computational method to describe the vibrational modes.
vibrational wavenumbers were
computed using ab initio HF and DFT
methods.
" The complete vibrational assignment
and spectroscopic analysis have
been carried out.
" The first order hyperpolarizability
and HOMO, LUMO energy gap were
theoretically predicted.
" The NBO analysis explained the
intramolecular hydrogen bonding.
a r t i c l e i n f o a b s t r a c t
Article history: In this work, the FT-IR and FT-Raman spectra of 5-ethyl-5-phenyl-1,3-diazinane-4,6-dione have been
Received 24 July 2012 recorded. The optimum molecular geometry, normal mode wavenumbers, infrared and Raman intensi-
Received in revised form 16 January 2013 ties, Raman scattering activities, corresponding vibrational assignments and Mullikan atomic charges
Available online 1 February 2013
were investigated with the help of HF and B3LYP(DFT) methods using 6-31G(d,p) basis set. The assign-
ments of vibrational spectra have been carried out with the help of normal co-ordinate analysis (NCA)
Keywords: following the scaled quantum mechanical force field (SQMFF) methodology. The stability of molecule
HF
has been analyzed by NBO analysis. The calculated HOMO and LUMO energies show that charge transfer
DFT
NBO
interactions take place within the molecule. Finally, the Mulliken population analysis on atomic charges
MEP of the title compound has been calculated.
HOMO–LUMO Ó 2013 Elsevier B.V. All rights reserved.
⇑ Corresponding author at: Research scholar, Manonmanium Sundaranar University, Tirunelveli 627 012, Tamil Nadu, India. Tel.: +91 9442721543.
E-mail address: isacpaulraj@hotmail.com (E. Isac Paulraj).
1386-1425/$ - see front matter Ó 2013 Elsevier B.V. All rights reserved.
http://dx.doi.org/10.1016/j.saa.2013.01.048
E. Isac Paulraj, S. Muthu / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 106 (2013) 310–320 311
E. Isac Paulraj, S. Muthu / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 106 (2013) 310–320
82 – – 3379 3038 0.126 28.01 3210 3086 0.198 33.67 mCH (99)
81 – – 3375 3034 0.167 11.48 3205 3081 0.188 2.53 mCH (98)
80 – – 3365 3025 0.242 16.78 3199 3076 0.209 15.07 mCH (99)
79 – – 3352 3014 0.177 20.19 3188 3065 0.175 21.4 mCH (99)
78 3332vw – 3341 3004 0.013 13.33 3180 3057 0.025 13.26 mCH (99)
77 – – 3309 2975 0.211 7.02 3157 3035 0.193 8.08 mmCH3ip (89), mCH3op (7)
76 3217vs 3236vw 3282 2951 0.123 15.44 3121 3001 0.267 14.83 mCH3op (91), mCH3ip (6)
75 3105w – 3275 2945 0.304 22.65 3116 2996 0.253 17.87 mmCH3ss (96)
74 2993vw 3062s 3253 2925 0.368 16.48 3109 2989 0.281 24.05 mCH2ss (47), mCH2as (47)
73 2977m 3003m 3221 2896 0.188 23.75 3068 2950 0.206 22.43 mCH2ss (49), mCH2as (49)
72 2944m 2944s 3197 2874 0.341 22.34 3055 2937 0.306 24.02 mCO (74), mCN (9), btrig1 (7)
71 2885s 2887m 3194 2872 0.328 20.64 3004 2888 0.373 21.21 mCO (73), mCN (8)
70 1970vw 1963vw 1979 1779 1.000 10.42 1807 1737 1.000 11.48 xHCN (17), bCH2wa (16), bCH2ro (12), bCH2ro (11), bCH3ip (9), bCH3op (6)
69 1951vw 1942vw 1950 1753 0.981 11.31 1778 1709 0.905 10.98 mCC (67), bHCC (22), bsym2 (10)
68 1803vw – 1807 1625 0.122 21.09 1657 1593 0.139 23.5 mCC (61), bHCC (18), basym2 (8)
67 1711m 1700m 1778 1599 0.085 11.86 1635 1572 0.098 11.7 bCH3ip (65), bCH3op (11), bCH2ro (8)
66 1697m – 1676 1507 0.100 15.29 1539 1480 0.228 5.02 bHCC (62), mCC (34)
65 1668vs 1670s 1667 1499 0.205 3.87 1531 1472 0.113 13.18 bCH2sc (28), xHCN (19), bCH3ip (16), bCH3op (14), bCH2sc (6)
64 – – 1646 1480 0.703 8.17 1529 1470 0.150 18.24 bCH3op (66), bCH3ip (30)
63 – – 1645 1479 0.196 12.34 1509 1451 0.130 19.93 bCH2sc (60), bCH2ro (9), bHNC (7), bCH2wa (6)
62 – – 1628 1464 0.137 18.62 1496 1438 0.134 16.92 bHCC (47), mCC (33), bCCC (9), bCH2sc (7)
61 – – 1626 1462 0.149 6.69 1490 1432 0.191 6.1 bCH2wa (33), mCN (19), bHNC (17), bCH2tw (9), mCO (7)
60 – – 1618 1455 0.053 17.15 1487 1430 0.601 9.85 bCH2sc (22), bCH2wa (22), mCN (13), bCH3ip (12), bHNC (11), bCH3op (6)
59 1595vw 1598s 1608 1446 0.202 6.04 1478 1421 0.377 8.15 bCH3sb (41), bCH2wa (31), bCH2sc (15), mCC (6)
58 1579vw 1580m 1552 1395 0.131 5.31 1423 1368 0.171 8.14 bCH2ro (25), bCH2sc (23), bCH3ip (16), bHNC (6), bCH3op (5)
57 – – 1545 1389 0.207 8.6 1391 1337 0.244 12.33 bHNC (21), bCH2ro (18), bCH2sc (10), mCN (9), bHCC (8), bCH3ip (7)
56 1493vs – 1505 1353 0.671 9.77 1376 1323 0.261 6.34 bCH2wa (20), bHCC (13), bHNC (13), mCN (12), bCH2ro (12), mCC (10)
55 1464m 1499m 1502 1350 0.362 4.02 1374 1321 0.104 3.64 bCH2ro (26), bCH2sc (26), mCC (14), bHCC (10), bCH2tw (5)
54 1447s 1483w 1488 1338 0.220 3.58 1369 1316 0.644 12.26 bCH2wa (51), bCH2sc (24), mCC (12)
53 – 1465m 1444 1298 0.127 11.18 1342 1290 0.114 5.62 mCC (41), bCH2sc (24), bCH2ro (14), bHCC (8)
52 1401vs 1438m 1417 1274 0.044 14.28 1323 1272 0.063 11.73 bCH2ro (75), mCN (10)
51 1372vw 1410w 1377 1238 0.154 8.98 1305 1255 0.043 15.02 bCH3ip (27), bCH2wa (16), sButter (13), bCH3op (8), bCH3op (6)
50 1339m 1362w 1332 1198 0.062 9.88 1243 1195 0.132 10.66 mCN (55), mCC (13), bCH2wa (7), bONC (7), bCH2wa (5)
49 1316m – 1324 1190 0.054 13.7 1223 1176 0.073 15.07 bHCC (76), mCC (21)
48 1280s – 1310 1178 0.058 11.47 1206 1159 0.069 20.22 bCH2wa (27), mCC (17), bCH2sc (13), bCH3op (12), bCCC (6)
47 1270w 1280m 1275 1146 0.129 9.28 1190 1144 0.011 13.03 bCH (80), mCC (17)
46 – 1267w 1237 1112 0.211 13.86 1168 1123 0.132 12.04 mCC (44), bCH2wa (19), btrig2 (7), bCH (6), bCH2ro (6)
45 – – 1220 1097 0.245 11.86 1130 1086 0.203 14.82 mCC (46), mCN (20), btrig1 (6)
44 – 1206vw 1214 1092 0.149 8.81 1121 1078 0.191 7.55 mCC (45), bCH (27), bCH2wa (8), bCCC (6)
43 – – 1205 1083 0.121 12.93 1119 1076 0.251 10.29 mCN (32), mCC (24), bONC (9), bsym1 (7), bHNC (6), bCH2ro (6)
42 – 1195s 1203 1082 0.117 9.93 1113 1070 0.094 7.28 mCC (67), bHCC (17), btrig2 (7)
41 1155m 1191vw 1190 1070 0.058 1.15 1102 1059 0.192 10.07 mCN (36), mCC (28), bHNC (11), bONC (7), bCH2wa (5)
40 – 1160m 1134 1020 0.099 17.7 1060 1019 0.135 24.31 btrig2 (65), mCC (32)
39 – 1147vw 1131 1017 0.067 9.18 1018 979 0.052 17.48 xHCN (84), spuk2 (11)
38 1119vs 1112w 1116 1003 0.022 2.26 1015 976 0.146 29.98 mCC (19), bCH3ip (16), xHCN (10), sCH2 (7), bCCC (7), bCH2ro (6)
37 1076s 1105w 1097 986 0.141 10.64 1005 966 0.038 1.33 xHCN (87)
36 – 1079m 1089 979 0.092 35.74 988 950 0.017 2.74 mCC (23), bCH3op (12), bCH2ro (10), bCH2wa (10), mCN (8), btrig1 (8)
35 – – 1060 953 0.082 4.28 962 925 0.202 10.58 bCCC (25), mCC (19), bCH3ip (14), bCH2wa (10), bCH2sc (9), sbutter (5)
313
(continued on next page)
314
Table 2 (continued)
E. Isac Paulraj, S. Muthu / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 106 (2013) 310–320
31 997w 959m 966 869 0.026 10.74 872 838 0.021 14.94 btrig1 (43), mCN (15), basym1 (13), mCC (8)
30 954m 926m 879 790 0.253 11.02 802 771 0.201 13.88 xHCN (47), spuk2 (35), sbutter (14)
29 928w 901vw 857 771 0.106 8.52 787 757 0.114 10.78 xHCN (36), spuk2 (17), xCCO (14), mCC (10), spuk1 (8), bsym2 (6)
28 914m 841vw 835 751 0.274 6.62 766 736 0.278 9.76 spuk2 (34), xCH (24), xCCO (11), spuk1 (8), mCC (7), bsym2 (6)
27 786m 801m 805 724 0.188 3.83 733 705 0.176 9.02 xCCO (39), sast1 (15), bCCC (13), ssmt1 (8), xCH (7), sbutter (7)
26 773w – 797 717 0.175 10.53 720 692 0.249 9.47 mCC (23), bsym2 (21), xHCN (20), mCN (6)
25 763m 751vw 783 704 0.246 7.97 719 691 0.102 3.32 basym2 (81), mCC (6)
24 753w 711m 721 648 0.144 29.65 671 645 0.158 30.22 bONC (37), mCN (19), bCCC (12), sCH2 (9), xCH (8)
23 707w 670s 679 610 0.013 18.72 633 609 0.013 17.83 xHCN (39), ssmt2 (13), spuk2 (13), sbutter (7)
22 697vs 620m 651 585 0.117 11.35 598 575 0.111 11.23 xHCN (19), bONC (18), bsym2 (16), mCC (11), mCN (8)
21 655m – 604 543 0.250 12.59 557 535 0.253 13.7 xHCN (34), ssmt2 (11), bsym1 (9), mCC (9), bCH2ro (6)
20 579m 596m 590 530 0.382 21.93 549 528 0.367 21.16 bsym1 (20), sCH2 (14), bCH2sc (10), bCH2ro (9), basym1 (8), sbutter (7)
19 559m 582w 546 491 0.168 11.3 511 491 0.220 13.25 sCH2 (27), xHCN (19), basym1 (13), bCH2ro (9), sbutter (8), bCH2sc (6)
18 526s 508m 511 459 0.172 10.59 473 455 0.180 13.09 sCH2 (19), basym1 (18), sbutter (11), spuk1 (8), ssmt2 (6), sCH3 (5)
17 510vs 494vw 471 423 0.523 15.7 437 420 0.334 17.33 xHCN (50), sCH2 (16), sbutter (10)
16 464s 464m 461 414 0.197 11.83 433 416 0.480 18.78 sast2 (58), xHCN (18), ssmt2 (16), sbutter (8)
15 – – 455 409 0.114 9.49 419 403 0.037 6.55 bONC (25), mCC (21), xHCN (8), sCH2 (8), btrig1 (6), ssmt1 (5)
14 – 391s 406 365 0.160 21.3 372 358 0.146 20.49 bCCC (51), sCH2 (21), mCC (10), bONC (6)
13 – 339vw 373 335 0.189 20.16 346 333 0.198 19.36 bCCC (22), spuk1 (20), sCH2 (13), sCH3 (12), ssmt1 (5)
12 – 325m 348 313 0.118 13.14 324 311 0.128 14.13 spuk1 (27), sCH2 (26), ssmt1 (16), xHCN (16)
11 – 301m 303 272 0.037 12.19 282 271 0.045 12.25 sbutter (45), sCH2 (16), sbutter (11), sCH3 (8), bCCC (5)
10 – 258vw 279 251 0.079 16.21 255 245 0.056 15.82 sbutter (51), sCH2 (15), sCH3 (11), bCCC (5)
9 – 238vs 253 227 0.108 23.38 227 218 0.093 27.9 spuk1 (43), sCH2 (25), xHCN (15), sCH3 (7)
8 – – 219 197 0.083 7.39 203 195 0.092 7.67 sCH2 (22), sast1 (17), xHCN (16), ssmt1 (15), sbutter (10), bCCC (8)
7 – 206m 201 181 0.084 20.72 181 174 0.103 21.5 xHCN (38), sast1 (30), ssmt1 (19), sCH2 (7)
6 – 148vs 142 128 0.008 28.4 131 126 0.016 29.39 xCCC (33), ssmt1 (22), spuk1 (13), sCH3 (13), sast1 (11)
5 – 111m 126 113 0.049 22.68 116 112 0.057 20.57 sast1 (27), ssmt1 (19), sbutter (15), spuk1 (11), bCCC (6)
4 – 92vs 99 89 0.037 35.86 92 88 0.037 37.74 ssmt1 (45), spuk1 (17), sast1 (11), sCH3 (6), ssmt2 (5)
3 – – 88 79 0.052 45.59 83 80 0.060 53.78 sast1 (26), ssmt1 (25), spuk1 (21), xCCC (15), xHCN (9)
2 – – 67 60 0.098 61.33 56 54 0.110 69.69 ssmt1 (47), sast1 (40), xHCN (8)
1 – – 50 45 0.035 100 49 47 0.047 100 sbutter (36), sast1 (30), ssmt1 (23), xHCN (8)
Abbreviations: m, stretching; b, in plane bending; x, out of plane bending; s, torsion; ip, in plane; op, out of plane; ss, symmetric stretching; as, asymmetric stretching; trig, trigonal deformation; wa, wagging; ro, rocking; sc,
scissoring; tw, twisting; sym, symmetric deformation; asym, asymmetric deformation; puk, puckering; smt, symmetric torsion; ast, asymmetric torsion; butter, butterfly mode, vs, very strong; s, strong; m, medium; w, weak; vw,
very weak.
a
Relative absorption intensities normalized with highest peak absorption equal to 1.
b
Relative Raman intensities calculated by Eq. (1) and normalized to 100.
E. Isac Paulraj, S. Muthu / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 106 (2013) 310–320 315
coordinates following the recommendations of Fogarasi et al. [10] coordinates that may be present in the PED distribution shown in
are summarized in Supplementary Table S2. This method is also Table 2, we have discussed here only the dominant contributions
useful for determining the mixing of other modes. But mostly the to the total potential energy of normal modes of vibration.
maximum contribution is accepted as the significant mode. The
observed FT-Raman and FT-IR bands with their relative intensities, CAH vibrations
calculated wavenumbers and assignments are given in Table 2. The Normally, CAH stretching vibrations occurs in the region 3200–
experimental FT-IR and FT-Raman spectra with corresponding the- 3000 cm1 in the heteroatomic structure and moreover these
oretically simulated FT-IR and FT-Raman spectra for EPDD are vibrations are independent in nature and position of the substitu-
shown in Figs. 2 and 3, respectively, where the calculated infrared ents [18,19]. This title molecule has two CAH moieties in pyrimi-
intensities and Raman intensities are plotted against the vibra- dine ring (ring1) and five CAH moieties in phenyl ring (ring2).
tional frequencies. In the spectra, the theoretically simulated spec- The expected seven CAH stretching vibrations are C2AH18,
tra are more regular than the experimental ones because many C2AH19, C10AH21, C11AH22, C12AH23, C13AH24 and C14AH25. For
vibrations presenting in condensed phase lead to strong perturba- 4BrMBP2CN molecule, this wavenumber is assigned at
tion of infrared and Raman intensities of many other modes. The 3025 cm1 by Sebastian et al. [20]. Sundaraganesan et al. [21] as-
RMS error of the observed and calculated frequencies (unscaled) signed CAH stretching vibrations of aromatic ring at 3066 and
of EPDD is quite obvious since the frequencies are calculated on 3075 cm1 for 2-fluoro-5-methylbenzonitrile. Accordingly, in this
the basis of quantum mechanical force fields usually differ appre- title compound, the weak intensity peak at 3332 cm1 in FT-IR is
ciably from observed frequencies. This is partly due to the neglect assigned to CH stretching vibration. No Raman peaks are observed
of anharmonicity and partly due to the approximate nature of the in the range. The calculated wavenumbers 3038, 3034, 3025, 3014
quantum mechanical methods. In order to reproduce the calcu- and 3004 cm1 in FTIR and the wavenumbers 3086, 3081, 3076,
lated frequencies, the scale factors were refined and optimized 3065 and 3057 in FT-Raman bands are assigned to CH stretching
via a least squares refinement algorithm. There are two rings pres- vibrations. As indicated by the PED, with these modes, 99% contri-
ent in EPDD molecule and hence we discuss the vibrational assign- bution comes from pure stretching vibrations. The CAH in plane
ments of these rings separately one by one. Out of several internal bending vibrations usually occurs in the region 1430–990 cm1
316 E. Isac Paulraj, S. Muthu / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 106 (2013) 310–320
and is very useful for characterization purposes. The in-plane CAH vibrations. As seen from Table 2, C@O out of plane bending vibra-
bending vibrations appear in the range 1000–1300 cm1 and the tions (xCCO) contribute a little percent to some frequencies in the
CAH out of plane bending vibrations occur in the frequency range region 1036–786 cm1. The observed band at 1036, 928, 914 and
750–1000 cm1 [22,23]. For our title molecule, the CAH in-plane 786 cm1 in FTIR and 901, 841 and 801 cm1 in FT-Raman spec-
bending vibrations are observed in the region 1270–1036 cm1 trum (mode nos. 33, 29–27) are assigned to the C@O out of plane
in FT-IR and 1281–1036 cm1 in FT-Raman. The frequencies are bending mode.
calculated by HF method in the range of 1146–925 cm1 and DFT
method in the range 1144–902 cm1 (mode nos. 47–33) are well
Methylene group vibrations
correlated with the experimental frequencies. The maximum PED
The CAH stretching of the methylene groups are at lower fre-
contribution is 82% for CAH in-plane bending vibrations. The
quencies than those of the aromatic CAH ring stretching. The
CAH out of plane bending vibrations are predicted in the region
CH2 antisymmetric stretching vibrations are generally observed
983–760 cm1 are coincided very well with the observed frequen-
in the region 3000–2900 cm1, while the CH2 symmetric stretch
cies of FT-IR (914, 786, 753 cm1) and FT-Raman (841, 801,
were appearing between 2900 and 2800 cm1 [25,26]. The CH2
711 cm1). In general the aromatic CAH vibrations (stretching,
antisymmetric and symmetric stretching vibrations were observed
in-plane and out-of-plane bending) are calculated theoretically in
at 2993 and 2977 cm1 (FTIR), 3003 and 2944 cm1 (FT-Raman),
good agreement with experimentally accepted values [22,23].
respectively for EPDD molecule. The calculated antisymmetric
and symmetric CH2 stretching vibrations of the methylene group
CAO vibrations are at 2925 and 2896 cm1 (mode nos. 74 and 73) by HF method
The characteristic absorption bands of C@O stretching vibra- and 2989 and 2950 cm1 by B3LYP method. In the present assign-
tions of the title compound is very complex and appear as very ment, the order of frequency are CH2 deformation > CH2 scis > CH2
broad and strong IR bands [24]. The observed bands at 2944, wagg > CH2 twist > CH2 rock. The recorded spectrum shows only
2885 cm1 (FTIR) and 2944, 2887 cm1 (FT-Raman) cm1 can be two medium strong peaks at 1464, 1447 cm1 (FTIR) and at
assigned to the C4@O7 and C6@O8 stretching modes, respectively. 1499, 1483 cm1 (FT-Raman) are assigned to CH2 scissoring and
They were calculated by HF and B3LYP at 2874, 2872 cm1 and wagging vibrations. The computed values of both models show
3055, 3004 cm1, respectively. Although the C@O bonds in the good agreement with the above experimental data. From the
molecule have no hydrogen bonding in the solid phase, this theoretical calculations, the CH2 wagging modes are predicted at
differences between experimental and theoretical frequencies for 1353and 1338 cm1 (mode nos. 56 and 54) by HF method and at
the C@O stretching bands are due to large anharmonicity in the 1323 and 1316 cm1 by B3LYP method. It shows excellent
E. Isac Paulraj, S. Muthu / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 106 (2013) 310–320 317
correlation with the FTIR band at 1493 and 1447 cm1 and FT-Ra- vibrations, respectively. The ring bending modes of EPDD are also
man band at 1483 cm1 and also shows the maximum PED contri- listed in Table 2. In general, the other ring stretching modes are
bution of 87%. The peaks observe at 1464 cm1 in FTIR and at in conformity with the literature values [38,39].
1499 cm1 in FT-Raman and the calculated wavenumbers
1350 cm1 in HF and 1321 cm1 in B3LYP are assigned to CH2 Molecular electrostatic potential
twisting vibrations. The CH2 rocking vibrations are also predicted
at lower wavenumbers with good correlation of experimental data. Molecular electrostatic potential (MEP) at a point in the space
around a molecule gives an indication of the net electrostatic effect
Methyl group vibration produced at that point by the total charge distribution of the mole-
Methyl groups are generally referred as electron donating sub- cule and correlates with dipole moments, electronegativity, partial
stituents in the aromatic ring system. Whenever a methyl group is charges, and chemical reactivity of the molecule. In the majority of
present in a compound, it gives rise to two asymmetric and one MEPs, while the maximum negative region which preferred site
symmetric stretching vibration [27]. The asymmetric stretch is for electrophilic attack indications as red color, the maximum posi-
usually at higher wavenumber than the symmetric stretch. The tive region which preferred site for nucleophilic attack symptoms as
asymmetric stretching vibrations of CH3 are expected in the region blue color. The color grading of resulting surface simultaneously dis-
2925–3000 cm1 and the symmetric CH3 stretching vibrations in plays molecular size, shape and electrostatic potential value which
the range 2905–2940 cm1 [28,29]. The predicted asymmetric are very useful in research of molecular structure with its physico-
and symmetric stretching vibrations for CH3 are at 3105, chemical property relationship [40,41]. The molecular electrostatic
2993 cm1 (mode no. 75 and 74) in FT-IR band and at 3062 cm1 potential (MEP) map and the electrostatic potential contour map
in FT-Raman band. FTIR band at 3217 cm1 and FT-Raman band for positive and negative potential of the title compound EPDD are
at 3236 cm1 (mode no. 76) were assigned as in-plane and out- shown in Supplementary Figs. S1 and S2. The MEP is a plot of electro-
of-plane CH3 stretching. The CACH3 vibrations usually combine static potential mapped onto the constant electron density surface.
with CAH in-plane bending vibration [19,21]. The active funda- Different values of the electrostatic potential are represented by
mental mode is observed at 1206 cm1 in FT-Raman is identified different colors. Red represents the regions of the most negative
as CACH3 stretching vibration. The CACH3 stretching mode shows electrostatic potential; blue represents the regions of the most
good agreement with computed wavenumber at 1092 cm1 in HF positive electrostatic potential. Potential increases in the order
and 1078 cm1 in B3LYP. The rocking mode of the CH3 group usu- red < orange < yellow < green < blue. The color code of this map is
ally appears in the region 1070–1010 cm1 [30–32]. Aromatic in the range between 0.09394 a.u (deepest red) and 0.09394 a.u
compounds display a methyl rocking (rCH3) in the neighborhood (deepest blue) in compound, where blue indicates the strongest
of 1045 cm1 [29]. In the present work, the rCH3 vibration is ob- attraction and red indicates the strongest repulsion. Such mapped
served at 1119 cm1 in FTIR spectrum. The theoretically calculated electrostatic potential surfaces have been plotted in B3LYP/6-
value (1070 cm1) shows good agreement with recorded spectral 31G(d,p) basis set using the computer software Gauss view. As can
data with PED contribution of 93%. The CH3 symmetry bending be seen from MEP map of the title molecule, while regions having
vibration is assigned at 1595 cm1 in FT-IR (1598 cm1 in FT-Ra- the negative potential are over the electronegative atoms (oxygen
man) was calculated at 1478 cm1 in B3LYP. The CH3 torsional atoms), the regions having the positive potential are over the hydro-
mode is expected below 100 cm1. The observed wavenumber gen atoms. The negative potential value is 0.00825473 a.u. for oxy-
(in FTRaman) at 92 cm1 (mode no. 4) is assigned to CH3 torsional gen atom. A maximum positive region localized on the hydrogen
mode, shows good agreement with computed wavenumber at atoms bond has value of +0.0932852 a.u. From these results, we
89 cm1 by HF method and 88 cm1 by B3LYP method. The methyl can say that the O atoms indicate strongest repulsion and H atoms
group assignments proposed in this study is also in agreement indicate the strongest attraction.
with the literature values [33,34].
NBO analysis
Ring vibration
The title compound consists of one pyrimidine ring and one
NBO analysis provides the most accurate possible ‘natural Lewis
phenyl ring. Most of the ring vibrational modes are affected by
structure’ picture of /, because all orbital details are mathemati-
the substitutions in the ring of the title molecule. The characteristic
cally chosen to include the highest possible percentage of the elec-
ring stretching vibrations are assigned in the region 1650–
tron density. A useful aspect of the NBO method is that it gives
1300 cm1 [35,36]. The main contributions corresponded to mode
information about interactions in both filled and virtual orbital
nos. 46, 45, 42 and 40 (trigonal bending), to nos. 31, 29, 28, 26, 25,
spaces that could enhance the analysis of intra- and intermolecular
22 and 21 (symmetry bending) and to 31, 25, 20, 19 and 18 (asym-
interactions. The second-order Fock matrix was carried out to eval-
metry bending). The presence of conjugate substituents such as
uate the donor–acceptor interactions in the NBO analysis [42]. The
CAO, CAC, CAN or the presence of heavy element causes a doublet
interactions result is a loss of occupancy from the localized NBO of
formation. Therefore, the CAC stretching vibrations of EPDD are
the idealized Lewis structure into an empty non-Lewis orbital. For
found at 1951 cm1 in FTIR and 1942 cm1 in Raman spectrum.
each donor (i) and acceptor (j), the stabilization energy E(2) associ-
The theoretically computed values for CAC vibrational modes by
ated with the delocalization i ? j is estimated as
B3LYP/6-31G(d,p) method gives excellent agreement with experi-
mental data. The identification of CAN stretching frequencies is a Fði; jÞ2
rather difficult task, since the mixing of vibrations is possible in E2 ¼ DEij ¼ qi
zj zi
this region. The CAN stretching vibration is usually lies in the re-
gion 1400–1200 cm1. The CAN stretching is observed strongly where qi is the donor orbital occupancy, ei and ej are diagonal
at 1280 cm1 and is mixed with CAH in-plane bending vibration elements and F(i, j) is the off diagonal NBO Fock matrix element.
[37]. This frequency is also at the lower end of the expected range Natural bond orbital analysis provides an efficient method for
which may be also due to the interaction of CAC vibration, whose studying intra and intermolecular bonding and interaction among
frequency extends up to this value. In this study, the bands ob- bonds, provides a convenient basis for investigating charge transfer
served between 1493–997 cm1 and 1499–959 cm1 in FTIR and or conjugative interaction in molecular systems. Some electron
FT-Raman spectra of EPDD have been designated to CAN stretching donor orbital, acceptor orbital and the interacting stabilization
318 E. Isac Paulraj, S. Muthu / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 106 (2013) 310–320
energy resulted from the second-order micro-disturbance theory with other atoms. The maximum charge is due to the attachment
are reported [43,44]. The larger the E(2) value, the more intensive of negatively charged oxygen atoms O7 and O8.
is the interaction between electron donors and electron acceptors,
i.e. the more donating tendency from electron donors to electron HOMO–LUMO energy
acceptors and the greater the extent of conjugation of the whole
system. Delocalization of electron density between occupied Le- Many organic molecules that containing conjugated p electrons
wis-type (bond or lone pair) NBO orbitals and formally unoccupied are characterized and analyzed by means of vibrational spectros-
(antibond or Rydgberg) non-Lewis NBO orbitals are corresponded copy [47,48]. In most cases, even in the absence of inversion sym-
to a stabilizing donor–acceptor interaction. NBO analysis has been metry, the strongest bands in the Raman spectrum is weak in the
performed on the EPDD molecule using NBO 3.1 program as imple- IR spectrum and vice versa. But the intramolecular charge transfer
mented in the Gaussian 03W package at the DFT/B3LYP/6-31G(d,p) from the donor to accepter group through a single–double bond
level of theory in order to elucidate the intramolecular, rehybrid- conjugated path can induce large variations of both the molecular
ization and delocalization of electron density within the molecule. dipole moment and the molecular polarizability, making IR and
The corresponding results have been tabulated in Supplementary Raman activity strong at the same time. The experimental spectro-
Table S3. scopic behavior described above is well accounted for by ab initio
The intramolecular hyperconjugative interactions are formed calculations in p conjugated systems that predict exceptionally
by the orbital overlap between bonding CAC, CAH and antibond- large Raman and infrared intensities for the same normal modes
ing orbital which results in intramolecular charge transfer (ICT) [49]. It is also observed in out title molecule the bands in FT-IR
causing stabilization of the system. These interactions are ob- spectrum have their counterparts in Raman shows that the relative
served as increase in electron density (ED) in CAC and CAH anti- intensities in IR and Raman spectra are comparable resulting from
bonding orbital that weakens the respective bonds. The strong the electron cloud movement through p conjugated frame work
intramolecular hyperconjugative interactions of the r and p elec- from electron donor to electron acceptor groups. Highest occupied
trons of CAC, CAH bonds to the anti CAC, CAH bonds of the ring molecular orbital (HOMO) and lowest unoccupied molecular
lead to stabilization of some part of the rings as evident from orbital (LUMO) are very important parameters for quantum chem-
Supplementary Table S3. There occurs a strong intramolecular istry. We can determine the way the molecule interacts with other
hyperconjugative interaction of p electrons from C9AC10 to p(- species; hence, they are called the frontier orbitals. The orbital
C11AC12) (ED ffi 0.332e and E(2) = 22.57 kJ mol1), from C11AC12 determine the way in which the molecule interacts with other spe-
to p(C13AC14) (ED ffi 0.318e and E(2)= 21.38 kJ mol1) and from cies. HOMO, which can be thought the outermost orbital contain-
C13AC14 to p(C9AC10) (ED ffi 0.365e and E(2) = 23.06 kJ mol1). ing electrons, tends to give these electrons such as an electron
These interactions give rise to increasing the ED on p bonds lead- donor. On the other hand; LUMO can be thought the innermost
ing to stabilization of EPDD phenyl ring system with different sta- orbital containing free places to accept electrons [50]. Therefore,
bilization energies. The most important energy, related to the while the energy of the HOMO is directly related to the ionization
molecule is electron donating from LP(2) O7 to the antibonding potential, LUMO energy is directly related to the electron affinity.
acceptor r (N3AC4) and r(C4AC5) with stabilization energy Energy difference between HOMO and LUMO orbital is called as
26.53 and 22.13 kJ mol1. Further LP(2) O8 conjugate with energy gap that is an important stability for structures [51].
N1AC6 and C5AC6 through antibond i.e. r(N1AC6) and r(C5AC6) HOMO–LUMO helps to characterize the chemical reactivity and ki-
leads to stabilization energy of 26.51 and 22.14 kJ mol1, respec- netic stability of the molecule [52]. A molecule with a small gap is
tively. LP(1) N1 and LP(1) N3 give rise to stabilization of pyrimi- more polarized and is known as soft molecule. Recently, the energy
dine ring via conjugating with p(C6AO8) and p(C4AO7) leading gap between HOMO and LUMO has been used to prove the bioac-
the stabilization energy of 17.48 and 21.15 kJ mol1, respectively. tivity from intramolecular charge transfer (ICT) [53,54]. The fron-
According to Supplementary Table S3, intramolecular CAN O tier orbitals (HOMO, LUMO) of EPDD, with its energy for B3LYP/
bond like weak interactions are exposed in the NBO analysis by 6-31G(d,p) method are plotted in Supplementary Fig. S4. The
the interaction between the O lone pair and CAN antibonding HOMO and LUMO energy gap of EPDD calculated by HF/6-
orbital (LP(1) O7 ? r N3AC4, LP(1) O8 ? rN1AC6). Notwith- 31G(d,p) and B3LYP/6-31G(d,p) methods are given in Table 3.
standing the fact that the energetic contribution (1.88 kJ mol1) According to B3LYP/6-31G(d,p) calculation, the energy band gap
of hyperconjugative interaction is weak, these E(2) values are (DE) (translation from HOMO to LUMO) of the molecule is about
chemically significant and can be used as a measure of intramo- 6.2984 eV. The highest occupied molecular orbitals are localized
lecular delocalization. mainly on both the rings.
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