Jurnal PHP 1.
Jurnal PHP 1.
1094/PHP-08-19-0052-DG
Diagnostic Guide
Disease: Black rot. wilting, leaf chlorosis, and leaf drop (Clark and Moyer 2013). If the
vine of an infected plant is pulled from the field prior to harvest, a
Hosts: Sweetpotato (Ipomoea batatas), morning glory (Ipomoea lesion on the vine below soil level may be visible (Fig. 1). Active
sp.) (de Beer et al. 2014), and carrot (Daucus carota subsp. sativus) lesions will appear brown and necrotic (Fig. 1A), and black, globose
(Stahr and Quesada-Ocampo, unpublished). perithecia with long necks should be observed protruding from the
lesion surface (Fig. 1B). As the lesion matures, the infected tissue
Pathogen: Black rot of sweetpotato is caused by the fungal will become increasingly more necrotic and can cause the sweet-
pathogen Ceratocystis fimbriata (Ellis and Halst.) (Halsted 1890). potato vine to split open (Fig. 1C). Although such splitting has been
Although this is the original name of the pathogen upon first observed in greenhouse trials (Stahr and Quesada-Ocampo, un-
publication, multiple synonyms were introduced over time before published), there has been no record of such advanced lesions in the
returning to the original name. Formerly used synonyms for C. field.
fimbriata include Ceratostomella fimbriata (J.A. Elliot), Endoco- Postharvest, black rot of sweetpotato causes a hard rot in the
nidiophora fimbriata (R.W. Davidson), Ophiostoma fimbriata sweetpotato storage roots (Clark and Moyer 2013). C. fimbriata is
(Nannf.), and Spaeronaema fimbriatum (Sacc.) (Clark et al. 2015; able to infect sweetpotatoes through healthy skin tissue, but in-
Webster and Butler 1967). fection preferentially takes place at lateral roots, lenticels, and
wound sites (Lauritzen 1926; Stahr and Quesada-Ocampo 2020).
Infected sweetpotatoes will exhibit shallow, circular lesions on the
Taxonomy
Kingdom fungi, phylum Ascomycota, subphylum Pezizomy-
cotina, class Sordariomycetes, subclass Hypocreomycetidae, order
Microascales, family Ceratocystidaceae, genus Ceratocystis, spe-
cies fimbriata. Current taxonomy can be found at MycoBank,
www.mycobank.org.
The name C. fimbriata has been used to describe fungi capable of
infecting many different plants in multiple families. However,
thorough research into the genetic relationship of fungi within the
Ceratocystis genus and closely related genera has called for the
name C. fimbriata to be restricted to isolates derived from
sweetpotato or from the same phylogenetic species (de Beer et al.
2014; Harrington 2013).
FIGURE 2
Diagnostic symptoms of sweetpotato black rot caused by Ceratocystis fim-
briata. A, Dark and circular lesions form on the surface of the storage roots, FIGURE 3
usually centered around a wound, lenticel, or lateral root. B, Small black Use of carrot disc baiting for isolation of suspected Ceratocystis fimbriata
patches that are remnants of sporulation structures can often be observed in isolates. A, Infected tissue should be placed in an internal cavity cut into one
the lesion (arrows) and typically appear in the lesion center. C, Internally half of the carrot discs. B, The discs are reassembled and placed in a humidity
infected tissue will become black and necrotic, but necrosis does not typ- chamber with damp paper towels to prevent the discs from drying out. C and
ically extend beyond the vascular tissue. D, Fungal mycelia will grow out of the carrot disc after 4 to 5 days.
TABLE 1
Recipes for media commonly used for Ceratocystis fimbriata
isolation and propagation
Mediuma Per liter
Carrot agar
Bolthouse Farms carrot juice 160 ml
Agar powder 16 g
Carrot broth
Bolthouse Farms carrot juice, clarified via 100 ml
centrifugation
Malt yeast extract agar
Malt extract (2%) 20 g
Yeast extract (0.2%) 2g
FIGURE 4
Agar (2%) 20 g
Morphological features used for identification of Ceratocystis fimbriata. A,
Potato dextrose agar
Appearance of culture in carrot agar. B, Sexual ascospores given charac-
Potato dextrose agar powder 39 g
teristic hat shape due to a gelatinous sheath forming a brim (arrow). C,
a
Antibiotics can be added to any listed medium to control for bacterial Asexual spore types include cylindrical endoconidia and brown, globose
contaminants. Rifampicin and ampicillin at 20 mg/liter each are chlamydospores. D, Black perithecia with globose base and long tapering
recommended. neck. Scale bars have been included for size reference.
TABLE 2
Description of key morphological features used for identification of Ceratocystis fimbriata
Structure Colora Component Dimensionsa
Perithecia Dark brown to black Base Width: 110 to 250 mm
Height: 120 to 250 mm
Neck Base width: 28 to 40 mm
Top width: 16 to 24 mm
Length: Up to 900 mm
Hyaline to light brown Ostiolar hyphae Width: 2.2 mm
Number present: 7 to 16
Ascospores Hyaline Spore Width: 3.5 to 5 mm
Height: 3.0 to 4.5 mm
Length: 5 to 7.5 mm
Brimb Tapering width: 0.5 to 0.1 mm
Endoconidia Hyaline to pale brown Endoconidiophore Width: 3 to 8 mm
Length: 35 to 172 mm
Hyaline to subhyaline Spore Width: 3 to 7 mm
Length: 7 to 37 mm
Chlamydospores (aleurioconidiac) Pale to olive brown Conidiophore Width: 4 to 7 mm
(aleurioconidiophorec) Length: 10 to 76 mm
Spore Width: 6 to 16 mm
Length: 8 to 20 mm
a
All color and dimensions have been compiled from multiple publications (Clark and Moyer 2013; Engelbrecht and Harrington 2005; Morgan-Jones 1967;
Webster and Butler 1967). The largest published range in size for each structure component is shown.
b
Measurements taken with an electron microscope (Webster and Butler 1967).
c
Alternate nomenclature as used in Engelbrecht and Harrington (2005).
TABLE 3
Primer sequences to be used for molecular identification of Ceratocystis fimbriata
Region amplified Reference Primer name Primer sequence
Internal transcribed spacer region White et al. (1990) ITS1-F 59-CTTGGTCATTTAGAGGAAGTAA-39
ITS4 59-TCCTCCGCTTATTGATATGC-39
Translation elongation factor 1-a Geiser et al. (2004) ef1 59-ATGGGTAAGGARGACAAGAC-39
ef2 59-GGARGTACCAGTSATCATGTT-39
Acknowledgments
The authors thank all the members of the Quesada lab for their valuable help.